KEGG   Aliivibrio wodanis: AWOD_I_0127
Entry
AWOD_I_0127       CDS       T03808                                 
Symbol
mutM
Name
(GenBank) DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
awd  Aliivibrio wodanis
Pathway
awd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:awd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AWOD_I_0127 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:awd03400]
    AWOD_I_0127 (mutM)
Enzymes [BR:awd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AWOD_I_0127 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AWOD_I_0127 (mutM)
DNA repair and recombination proteins [BR:awd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AWOD_I_0127 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Mnd1
Other DBs
NCBI-ProteinID: CED70225
UniProt: A0A090IPN3
Position
1:146524..147339
AA seq 271 aa
MPELPEVETSRLGITPHLQGQTIKAIIVRVEKLRWPIPQELQLLVGQRIQSIRRRAKYLL
IDTPTGSAIIHLGMSGSLRVLDESISVAKHDHVDLILDNGKVLRYNDPRKFGSWLYAAVG
VDHDVLAKLGPEPLTDTFNAEYFSEKTKNKKTVVKQFVMNNAVVVGVGNIYASESLFMAK
IHPKTPVGELTQPQILRLVSEIKSVLATAIKQGGTTLKDFNQVDGKPGYFAQELHVYGRA
GKACLICQSLIQEEKIGQRNTFWCETCQPYK
NT seq 816 nt   +upstreamnt  +downstreamnt
atgccagaactaccagaagtcgaaactagtcgcctaggaataacaccgcacctacaaggg
caaactatcaaagccattatcgtaagagttgagaagttgcgctggcccatccctcaagag
ctgcaattattagttggacaaagaatccaatctattcgtcgtcgtgctaaatatttactg
attgataccccaacaggtagcgctattattcatcttggtatgtcgggaagcctacgcgta
ctggatgaaagtatttctgtcgctaaacatgatcacgtcgatctgattttagataatggt
aaagttttacgttataacgatcctcgtaagtttggatcttggttatatgcagcagtcggg
gttgatcatgatgtattagcaaagctaggaccagaacccctaactgatacttttaatgcc
gaatatttttcagaaaaaaccaaaaataagaaaaccgtcgtaaagcagtttgttatgaat
aatgctgtagtggtaggcgttgggaatatctatgctagtgaatctttatttatggctaaa
atacatcctaaaactccagttggcgagttaacgcaaccacaaatattacgattagtgagc
gaaataaaaagcgtgttagcaacggcgattaagcaaggtggaacgacgttaaaagatttt
aatcaagtagatggaaagcctggttattttgcacaagaattgcatgtttacggacgagcc
ggaaaagcgtgtttaatttgtcagtcactgatccaagaagagaaaatagggcaaagaaat
accttttggtgtgaaacctgccaaccctataaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system