KEGG   Ilumatobacter coccineus: YM304_40160
Entry
YM304_40160       CDS       T02501                                 
Name
(GenBank) putative SorC family transcriptional regulator
  KO
K11531  lsr operon transcriptional repressor
Organism
aym  Ilumatobacter coccineus
Pathway
aym02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:aym00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YM304_40160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aym03000]
    YM304_40160
Transcription factors [BR:aym03000]
 Prokaryotic type
  Other transcription factors
   Others
    YM304_40160
SSDB
Motif
Pfam: Sugar-bind MarR_2 HTH_23 Sigma70_r4_2 MarR Sigma70_r4 HTH_11 HTH_Crp_2 HTH_Tnp_4 HTH_24 HTH_28 HTH_31 HTH_3 HTH_29 HTH_38 HTH_IclR GntR HTH_30
Other DBs
NCBI-ProteinID: BAN04330
UniProt: A0A6C7ED87
Position
4532539..4533498
AA seq 319 aa
MNSTNTQPGDRETLVRVAWYYYRDNLTQAQIAKRLHVSRATAGRLLDRARQTGVVTIEID
TSGVGGLELAESICARYGLDDVVIIPQDEPSMSGQATNSRLALEAAHYLSRYLKPGATIG
VGWGDTVMRAMQVLKREAFRDASLVTLTGGIDAYTPKVTGIGNAALSDFIRFIPSPFLAS
SPEAASMLRRERAVTDVIELAKTADASLIGIGAVDRNATILQNGIVSDEQLTTLRDHGAV
GDILGEWYDPAGRVIDGEFQQLRIGVAVSDLQSMSNVIAVAGGMDKLEAIRAALNGGCVN
ALITSEDVARGLLLPARHG
NT seq 960 nt   +upstreamnt  +downstreamnt
gtgaacagcaccaacacccagcccggagaccgcgagacactcgttcgagtggcttggtac
tactaccgagacaacctcacccaggcgcagatcgccaagcgactccacgtgtcgagagcc
accgccgggcgcctgctcgatcgagcccgccagacgggcgtggtgaccatcgagatcgac
acgtcgggtgtcggcggcctcgaactcgcggagagcatctgcgctcgctacggactcgac
gacgtcgtgatcattccgcaggacgagccgtcgatgtcgggacaggccaccaactcgcgg
ctcgcgctcgaagcagcgcactacctgtcgcgttacctcaagccgggcgccaccatcggc
gtcggctggggcgacacggtgatgcgcgcgatgcaggtgctcaagcgggaagcgttccgc
gacgcatcgctcgtcacgctcaccggcggcatcgatgcgtacacgccgaaggtcaccggc
atcggcaatgcggcgctctccgacttcatccgcttcatcccgtcgccgttcctcgcgtcg
agccccgaggcggcgagcatgttgcgtcgcgaacgcgccgtgaccgacgtgatcgagttg
gccaagacggccgacgcgtcgctgatcggcatcggcgcggtcgaccgcaacgccaccatc
ctgcagaacggcatcgtctccgacgagcagttgaccacgctgcgcgatcacggcgccgtc
ggcgacatcttgggcgagtggtacgaccccgcgggtcgggtcatcgacggcgagttccaa
cagctccgcatcggtgtggcggtgagcgatctgcagtcgatgagcaacgtcatcgcggtc
gccggtggcatggacaagctcgaagcgatccgcgctgcgctcaacggtggctgcgtcaac
gcgctgatcacgtcggaagacgtggcccgcgggttgctgctgcctgcccgtcacggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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