KEGG   Buchnera aphidicola W106 (Myzus persicae): BUMPW106_CDS00224
Entry
BUMPW106_CDS00224 CDS       T03023                                 
Symbol
dead
Name
(GenBank) Dead
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
bapw  Buchnera aphidicola W106 (Myzus persicae)
Pathway
bapw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bapw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BUMPW106_CDS00224 (dead)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bapw03019]
    BUMPW106_CDS00224 (dead)
   03009 Ribosome biogenesis [BR:bapw03009]
    BUMPW106_CDS00224 (dead)
Enzymes [BR:bapw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BUMPW106_CDS00224 (dead)
Messenger RNA biogenesis [BR:bapw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BUMPW106_CDS00224 (dead)
Ribosome biogenesis [BR:bapw03009]
 Prokaryotic type
  rRNA helicases
   BUMPW106_CDS00224 (dead)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_22
Other DBs
NCBI-ProteinID: AHG60596
Position
complement(411456..413246)
AA seq 596 aa
MTHIESTFSFLGLNPFIIQSLTEMGYVKPSPIQAACIPLLLKGRDVLGMAQTGSGKTAAF
ALPLLHNLDINLKAPQILVLAPTRELAVQVAEAFSDFSKHMIGIHVLPLYGGQRYELQLR
ALKQGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEMLRMGFIEDVETIMAQIPKD
HQTALFSATMPEAIRRISKRFMKNPEEIKIQSNISTRPDIKQSYWMVCSRKTDALIRFLE
AEDFSATIIFVKTKNATLEVSEALERNGYNSAALNGDMNQALREQTLERLKNGRLDILIA
TDVAARGLDVDRISFVINYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTIKQSIPEVQLPKIELLSKRRLEQFAKKVQQQLESRDLEQYSALLDKLYFTDDLDIKTL
AAALLKMAQGERPLIIKPDLVINHRLSKEERRREDNRNSRIRRERRDNKDIDLYRIEVGR
NDGVEVRHIVGAIANEGNINSRNIGNIKLFSSYATIELPKGMSKDLLQYLTRTRILNKPI
NIKLLRDSRVYETKTTNRTTFNKDKNSNRRFSENRLNKSNFSKNESKTSFSRRRNV
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgactcatattgaaagcacattttcttttcttggtttaaacccttttattatccaatct
ttaactgaaatgggatatgttaaaccttctcctatacaagcagcgtgtattcctttgctc
ttaaaaggacgtgatgtattaggcatggcacaaaccggaagcggtaaaactgccgcattt
gcattgccgttgttacataatcttgatattaatttaaaagctcctcaaatattagtatta
gctcctacaagagaattagcagttcaagtagctgaagcattttcggatttttctaaacat
atgataggcatacatgtattacctttatatggtggacaaagatacgaattgcaattacgt
gctttaaaacaaggacctcaaattgttgtaggaactccaggacgtttattagatcattta
aaacgaggaactcttaatctttcaaatttacatggattagttttagatgaagcagatgaa
atgttacgcatgggatttatagaagatgtagaaactattatggcacaaattcccaaagat
catcagactgcattattttctgctacaatgccagaagcaatacgtcgaatttctaaacga
tttatgaaaaatccggaagaaataaaaatacaatctaatattagtacacgtccagatatc
aaacaaagttattggatggtctgtagtcgaaaaactgatgcgttaattcgatttttagaa
gctgaagatttttctgctactattatttttgttaaaactaaaaatgcaactttagaagta
tcagaagctttagaacgtaacggatataatagtgctgcattaaatggagatatgaatcaa
gctttacgagaacaaaccttagaaagattaaaaaatggtcgattagatattctaattgct
acagatgttgcagcacgcggtttagatgttgatcgtattagttttgttataaactacgat
attcctatggattcagaatcttatgttcaccgtataggtcgtacaggtcgtgcaggtcgt
gcaggtcgtgcattattatttgttgaaaatcgtgaacgtcgtttgttacgtaatatagaa
cgtactatcaaacaatctattccagaagtacaattaccaaaaattgagttattatctaaa
agacggcttgaacaatttgcaaaaaaagtacaacagcaattagaaagtcgagacttagaa
caatatagtgctttgttagataaactatattttacagatgatttagatataaaaacttta
gcagctgctttattaaaaatggctcaaggagaacgtcctttaattatcaaacctgattta
gtcatcaatcatcgtttatctaaagaggaacgtagacgagaagacaatcgtaacagtcga
atacgtcgagaacgtcgtgataataaagatatagatttatatcgcattgaagtaggacgt
aacgatggagtagaagtacgtcatattgttggagctattgctaatgaaggaaatattaat
agtcgtaatattggaaatattaaacttttttcttcctatgctacaattgaattacccaag
ggaatgtcaaaagatttattacaatatttgacacgtactagaattttaaacaaacctatc
aatataaaattattacgtgactctcgagtttacgaaactaaaacaacgaaccgtactaca
tttaataaagataaaaatagcaatcgtcgtttttctgaaaatcgtttaaataaatctaat
ttttctaagaacgaatcaaaaacgtctttttctcgtcgtaggaatgtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system