KEGG   Brucella canis SVA13: DA85_05020
Entry
DA85_05020        CDS       T03305                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
bcas  Brucella canis SVA13
Pathway
bcas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DA85_05020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcas03019]
    DA85_05020
Enzymes [BR:bcas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DA85_05020
Messenger RNA biogenesis [BR:bcas03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DA85_05020
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 UTP25
Other DBs
NCBI-ProteinID: AHZ81305
Position
1:1020372..1021979
AA seq 535 aa
MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVVIIKWNYVRQV
ALARRFKADRECAVPLKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPS
QLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTI
RNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVL
DEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAI
HGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGR
TGRNGASGASITLYDPATEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTE
QAESRKAPAHKHRRPAQKAGEQHRAGAHASAGEAAPKPKRPFRRKRRSNGGQRAA
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgggccgactgattttcatcggctttcccggacttggacttgttgcgtcacatcttcca
caccggaatggtccggcagaggaagggacccgaaatcagttcgggcacgacagcgcaagt
cgccagagagttttccggcgtcccgtcgttatcattaaatggaattatgttcggcaagtt
gcgcttgcccggcgttttaaagcggaccgcgaatgcgcggtgccgctgaaagagattgaa
ttgacaaaagaaaacacgggcggcttcgccgctctcggtatcaccggcgttctgctcaaa
ggcgtggaagctgccggcatgaccgagccgaaaccgatccagacgcaagccatcccgtcg
caacttgaaggccaggacatcctcggcatcgcccagacgggttccggcaagacggcggct
ttcagcctgcccatccttcagaaaatcatcggccttggcgacaagcgccgcccgaaaacc
gcacgcgcgctgatcctggcgccaacgcgtgaactggcagtacagattgagcagacgatc
cgcaatgtctccaaaagcgcgcatatctccaccgcgttggttctcggcggcgtgtccaag
ctttcgcagatcaagcgtatcgcacccggcatcgatgtgctcatcgcaacacccggccgc
ctgacggacctgatgcgcgatggcctcgtggacctgtcgcagacccgctggctggttctc
gatgaagccgaccgcatgttggacatgggcttcatcaatgatgtgaagcgcattgccaag
gcaacacacgccgaacgccagaccgcactgttctcggctaccatgccaaaggagatcgca
tcgctggccgaacgtctgctgcgcgatccggtacgggtggaagtggcgccacaaggcacc
acggcttctgaaattacgcaggtcgtgcatccagtgccgacgaaggagaagcgccgcctg
ctttcagccatgctgaccgatgccgacatgcgttccgtcatcgtcttcacgcgcaccaag
cacggagcagatgccgtcgtgcgccatcttgagcgcgaccgctatgatgttgcggccatc
cacggcaataagtcgcagaatgcacgccagcgcgcgctgaacggtttccgcgatgggacc
ctgcgcattctggttgcaacggatattgcagcgcgcggcatcgacgtgcccggcatcagc
catgtggtgaattacgacctgccggacgagccggaaacctatgtgcaccgcatcggccgc
accggccgcaacggcgcaagcggcgcttccatcacgctttatgatccggctacggaagaa
tcaaagctgcgggcggttgagcgcgtcacgcggagcaaactttcgatcaaggatgcgccg
gtgaagcttgcaccagcacctgtcgccaaaggccccgcaccccagggccagcggactgaa
caggctgagagccgcaaggcgcccgcgcacaagcatcgccgccccgcacagaaggcgggc
gagcagcatcgcgccggggcacatgccagcgccggtgaggccgcgccgaagccgaagcgt
cccttccgccgcaagcgccgcagcaatggcggccagcgcgccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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