KEGG   Bacillus cereus G9842: BCG9842_B4968
Entry
BCG9842_B4968     CDS       T00815                                 
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bcg  Bacillus cereus G9842
Pathway
bcg03030  DNA replication
bcg03410  Base excision repair
bcg03420  Nucleotide excision repair
bcg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BCG9842_B4968 (ligA)
   03410 Base excision repair
    BCG9842_B4968 (ligA)
   03420 Nucleotide excision repair
    BCG9842_B4968 (ligA)
   03430 Mismatch repair
    BCG9842_B4968 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcg03032]
    BCG9842_B4968 (ligA)
   03400 DNA repair and recombination proteins [BR:bcg03400]
    BCG9842_B4968 (ligA)
Enzymes [BR:bcg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BCG9842_B4968 (ligA)
DNA replication proteins [BR:bcg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BCG9842_B4968 (ligA)
DNA repair and recombination proteins [BR:bcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BCG9842_B4968 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BCG9842_B4968 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     BCG9842_B4968 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BCG9842_B4968 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD RNA_pol_A_CTD HHH PTCB-BRCT BRCT_2 HHH_3 5_3_exonuc RNA_ligase DUF5395
Other DBs
NCBI-ProteinID: ACK97485
UniProt: B7IUW5
Position
313256..315265
AA seq 669 aa
MSKEIAKKRIEELRDLLNTFNYQYHVLDNPSVSDAEYDRNMQELIKLEAENPEFMSEDSP
SVRVGGTILDIFEKVTHKSPMLSLGNAFNEGDLRDFDRRVRQGIDDANVRYICELKIDGL
AVSLHYEKGRFIQGATRGDGVTGEDITQNLKTIKAIPLRLNEEVTLEARGEAYMPKRSFV
KLNEEKEQNGEDVFANPRNAAAGSIRQLDPKIAAKRNLSMFVYGLANVEEKTIPSHSESL
DFLGELGFKTNPNRRTCETIEEVIAYVEEWQEKRPHLDYEIDGIVIKVDDVALQESLGTT
AKSPRWAIAYKFPAEEVVTRLTGIELSVGRTGVVTPTAELEPVRVAGTIVRRASLHNEDL
IREKDIRIGDYVVVKKAGDIIPEVVNVIFDKRTGEEEEYRMPTHCPACESELVRLEEEVA
LRCINPTCPAQIREGLIHFVSRNAMNIDGLGERVITQLFDADYIRTFADLYALTKEQLLQ
LERFGEKSATNLIQAIENSKENSLERLLFGLGIRHVGAKAARTFAEHFETMDELVKATEE
ELKAINEIGEKMAQSVVTYFDNEDVLELLQQFKEYGVNMTYKGIKIADLQNVESYFAGKT
VVLTGKLEVMGRSEAKKKIEALGGKVTGSVSKSTDLVVAGESAGSKLAQAEKHNVEVWNE
ERFLQELNK
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgtcaaaagagatagcaaaaaaacgtatagaagaactgcgtgatttgttaaatacattt
aattatcaatatcacgtattagacaatccttctgtttctgatgcggaatatgaccgtaat
atgcaggagcttataaaattagaagcagagaacccagagtttatgagtgaggattctccc
tccgttcgcgttgggggaactattcttgatatattcgaaaaagtaacacataagtcacca
atgttaagtttaggaaatgcatttaacgaaggagatttacgtgatttcgacagaagagta
cgtcaaggaattgatgatgcgaatgtaagatatatatgtgaattaaaaattgacgggctt
gccgtttcgcttcattatgaaaaaggacgcttcattcaaggggcgacacgtggtgatggt
gtaacgggtgaagatattactcaaaatttaaaaacgattaaagctatcccacttcgttta
aatgaagaagtaacgttagaagcacgaggcgaagcttatatgccgaagcgttcatttgtt
aaactaaatgaagaaaaagagcaaaatggagaagatgtatttgcgaatccgcgtaatgcg
gcagcaggctcaatacgtcaacttgatccgaaaattgcagcgaagcgtaacttatctatg
tttgtgtacggtcttgcgaatgtagaagaaaaaacaattccatcgcacagtgaatcgctt
gatttcctaggtgaactcggatttaagacaaatccaaatcgccgtacatgtgaaacaatc
gaagaggttatagcttatgtagaagaatggcaagaaaaacgtccgcatcttgattatgag
attgatggaatcgttataaaagtagatgatgttgctcttcaagaaagtctaggaactaca
gcgaagagtccaagatgggcgattgcttataaattcccggctgaagaagttgtaacgaga
ttaacaggcattgaattaagtgttggccgaacaggggttgtaacaccgactgcagagcta
gagccagtgagagttgctggtacgatcgttcgtcgtgcttctttacataacgaagattta
attcgtgaaaaagacattcgaattggtgactacgttgttgtgaagaaggctggagatatt
attcctgaagttgtgaacgttatttttgataagcgtactggtgaagaagaagaataccgc
atgccaacgcattgcccagcatgtgagagtgaacttgttcgtttagaagaagaagtagca
cttcgatgtataaatccaacttgtccagctcaaattcgcgaaggattaattcatttcgtt
tcaagaaatgcaatgaatattgatgggcttggagaacgtgtcattacacaactttttgat
gcagattatattcgtacatttgctgatttatatgcattaacgaaagagcagttattacag
ttagaacgttttggtgaaaaatcagcaacaaacttaatacaagcaattgaaaattctaaa
gaaaactcgttagagcgattattatttggtcttggaattcgacacgttggagcgaaagca
gcacgtacatttgcagagcactttgaaacgatggatgagcttgtaaaagcaacagaagaa
gaactaaaagcaattaatgaaattggcgaaaaaatggctcaatctgttgtgacatatttt
gataatgaagatgtattagagttattacagcagtttaaagagtatggcgtgaatatgaca
tacaaaggtataaaaattgcagatttacaaaatgttgaatcttacttcgcaggaaaaacg
gttgttttaacaggtaagctagaagttatgggacgaagtgaagcgaagaagaagattgag
gcattaggtggaaaagtaacaggaagtgttagtaagagtacagatttggttgttgcaggt
gaatcggctggttcgaaattagcacaagcggagaaacataatgttgaggtttggaatgaa
gagaggttcttacaagagctaaataagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (14)   
   Pfam (14)   
All databases (35)   

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