KEGG   Bdellovibrio sp. qaytius: CIK05_10275
Entry
CIK05_10275       CDS       T05880                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bdq  Bdellovibrio sp. qaytius
Pathway
bdq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bdq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIK05_10275 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdq03019]
    CIK05_10275 (pnp)
   03016 Transfer RNA biogenesis [BR:bdq03016]
    CIK05_10275 (pnp)
Enzymes [BR:bdq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     CIK05_10275 (pnp)
Messenger RNA biogenesis [BR:bdq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CIK05_10275 (pnp)
Transfer RNA biogenesis [BR:bdq03016]
 Prokaryotic type
  tRNA degradation factors
   CIK05_10275 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 KH_2 DUF3016
Other DBs
NCBI-ProteinID: AZZ37159
UniProt: A0A3T0RSY1
Position
complement(2122002..2124098)
AA seq 698 aa
MVNTVTTSIAGKQITIETGRLAKQTDGSVLVTCGNNVVLVTAVSSKEAKPGQSFFPLTVE
FIEKYYAIGKIPGGYFKREGKPSNDSVLSARMVDRPIRPLFPEGYLNDTQVVATILSADG
SFSMDVLASLGASAALHISNIPFAGPTATCQVARVNGQFIANPTPEQLTQSDMDIIVSGT
KNGLLMVEGETKFISEADALAALKFGHQALMPLLQMQEELREKTGSVAKRKFTAATIDAD
FRTQAETLLTPMIQKALSQKIKQDRYAAFDAAKDAAVTQLVKTLTDEKLQAQRKSEVSTV
IEDIKYKVARAQILDTASRIDGRDLKTVRPIMCEVGLLPRAHGSGLFQRGETQCLATVTL
GTADDEQTVETLNGTVKRKFSLHYNFPPYSVGEVGRFGGQGRREIGHGNLAERSVKAVAP
DHAQFPYTIRIVSEVLESNGSSSMGSVCAATLAMLDAGIKVKTNIAGIAMGLIKEGDRVA
VLSDILGDEDHLGDMDFKVAGSSTGITALQMDIKIDSVSFAVMETALNQARDGRLFILGE
MEKVMKAPRGQMSEFAPRIETIKIKVDKIREVIGSGGKVIRSITEQTGVKIEIQDDGTIN
IASSDPAATKKAIAIIESICAEAEVGKVYKGKVMKIAEFGAFVEILPNTQGLLHISELAN
ERVRQVTDVLKEGEMIDVKVLEVDRSGRIKLSRKALMQ
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggtcaacacagttacaacgtcaatcgcaggaaagcaaatcacaatcgaaacaggacgc
cttgctaaacaaactgatggttcagttttagttacatgtggcaacaacgtagttttagtt
actgcagtttcatctaaagaagcaaaaccaggacaaagctttttccctttaacagttgag
ttcatcgaaaaatattacgctatcggaaaaattccgggtggttatttcaaacgtgaaggt
aaaccttcaaatgattcagtactaagtgctcgtatggttgatcgtccgatccgcccactt
tttcctgaaggttacttaaacgacacgcaagttgttgcaacaatcctttctgctgacggt
tcattctctatggacgtattagcttctttaggagcttcagcggcattacatatttctaat
attccatttgctggtccgacagcgacttgccaagttgctcgcgtaaacggtcaattcatc
gcaaatcctactcctgagcaattaactcaaagtgatatggacatcatcgtatctggaact
aaaaacggtttattaatggttgaaggcgaaacgaagtttatctctgaagcagatgcttta
gctgctttaaaattcggtcaccaagctttaatgccattattacaaatgcaagaagagtta
cgcgaaaaaacgggatcagtggctaaacgtaaattcacagctgcaactatcgatgctgat
ttcagaactcaagctgaaacattattaacaccaatgattcaaaaagccttatcacaaaaa
attaaacaagatcgttacgcggcatttgatgcagctaaagatgctgctgtgactcaacta
gtaaaaactctaactgatgaaaaacttcaagctcaacgtaaatctgaagtttctacagtt
attgaagacattaaatacaaagtagctcgcgcgcaaattttagatacagcttctcgtatt
gatggtcgtgatttaaaaacagttcgtccaatcatgtgtgaagttggtttattaccacgt
gcccatggttctggtttatttcaacgtggtgagactcagtgtttagcgactgttacttta
ggtacagctgatgacgaacaaacagttgagacattaaacggaactgttaaacgtaaattt
tcattacactacaacttccctccatactctgtgggtgaagtgggtcgttttggcggtcaa
ggtcgtcgtgaaatcggtcacggaaatttagctgagcgttcagttaaagctgttgctcct
gatcatgcgcaatttccttacacaatccgtatcgtatcagaagttttagaatcgaacggt
tcaagctcaatgggttcagtatgtgctgcaactcttgcgatgcttgatgctggtattaaa
gttaaaactaacatcgccggtatcgcgatgggcttaattaaagaaggcgaccgcgtagcg
gttctttctgatatcttaggtgatgaagatcatttaggtgatatggatttcaaagttgca
ggatcttcgactggtatcacagctttacaaatggatatcaaaatcgattcagtttctttt
gcagttatggaaacagcacttaaccaagctcgtgacggacgtttattcatcctaggcgaa
atggaaaaagtgatgaaagctccacgcggtcaaatgtctgaatttgctccacgtattgaa
acgatcaaaattaaagttgataaaatccgtgaagttattggttcgggcggtaaagttatc
cgttcaatcactgaacaaactggcgttaaaatcgaaatccaagatgacggtacaattaac
atcgcttcatctgatccagcagcaactaaaaaagctatcgcgatcatcgaatcaatctgt
gctgaagctgaagttggcaaagtgtacaaaggtaaagtaatgaaaattgctgaattcgga
gctttcgtagaaatccttccgaacacacaaggtttattacatatctctgagcttgctaac
gagcgcgtacgccaagtgactgacgttcttaaagagggcgaaatgattgacgtaaaagta
ttagaagttgatcgttctggccgtattaaactttctcgcaaagcattgatgcagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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