KEGG T03799: OI25

Paraburkholderia fungorum: OI25_2913

Entry

OI25_2913         CDS       T03799

Symbol

mutS

Name

(GenBank) DNA mismatch repair protein MutS

K03555

DNA mismatch repair protein MutS

Organism

bfn Paraburkholderia fungorum

Pathway

bfn03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:bfn00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    OI25_2913 (mutS)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bfn03400]
    OI25_2913 (mutS)
DNA repair and recombination proteins [BR:bfn03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     OI25_2913 (mutS)

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_27 AAA_29 AAA_23

Other DBs

NCBI-ProteinID:

AJZ59299

Position

1:complement(3276810..3279446)

AA seq 878 aa
MMQQYLRIKADHPGTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGNPIKMAGVP
HHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDAALLSDKSDVY
LMALCVAHNRRGVATSVGLAWLNLASGALRLAEVAPDQVAAALERIRPAEILVADTSADS
ASWTPPVNASALTRVPVWHFDIASGTQRLCDQLEVAGLDGFGAHSLTAACGAAGALLLYA
AATQGQQLRHVRSLKVEYESEYIGLDPATRRNLELTETLRGTESPTLCSLLDTCCTTMGS
RLLRHWLHHPPREAAVAQARQQAIGALLDAPLAASVDTLRGALRQISDIERITGRLALLS
ARPRDLSSLRDTFIALPELRTQLAAVSSNADSLARIDASLEPPQACVELLRRAVAQEPSA
MVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIGNLRVEYNKVHGFYIEV
TRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERSLYDALLQALLP
FIPDCQRVAAALAELDLLAAFAERARALDWVAPTFSPDTGIEIEQGRHPVVEAQVEQFIA
NDCTLTPERKLLLITGPNMGGKSTFMRQTALIALLAYVGSYVPARRASFGPIDRIFTRIG
AADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLSH
NGCHTLFATHYFELTQLPAEFPHAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVAQL
AGVPNAVIRAARKHLAHLEQQSAAQPAPQLDLFATPVPMLLEDAEDERGAKPTAAVSPAM
QALAERLRAIDPNDLRPREALDLLYELHELATAPDADH

NT seq 2637 nt +upstreamnt +downstreamnt
atgatgcagcagtatctacgcattaaggcggatcatccgggcacgctggtgttctaccgg
atgggcgacttctatgaactctttttcgaagatgcggaaaaagccgcgcgcctgctcgat
ttaacacttacgcagcgtggtgcgtcggcaggcaacccgatcaagatggcgggcgtgccg
catcatgcggtcgaacagtatctggccaagctggtgaagctcggcgaatccgtcgcgatt
tgcgagcagatcggcgatccggctacgtcgaaagggcctgtcgagcgcaaagtcgtacgt
gtagtcacgccgggcacgctgacggacgcagcccttctgtccgacaagagcgatgtctat
ctgatggcgctgtgcgtcgcgcataaccggcgcggcgtcgcgacgagcgtcgggctcgcg
tggctgaatctggcgagcggcgcattgcgcctcgccgaagttgctcctgatcaggtggca
gccgcgctcgaacggattcgtcccgcggaaattctggtggccgatacgtcggccgattcc
gcgagctggacgccgcccgtgaacgccagcgccctcacccgcgtgccggtctggcacttc
gatatcgcctcgggcacgcaacgtctgtgcgatcaactggaagtggccggcctcgacggc
ttcggcgcgcattcgctgaccgccgcatgcggagcggcaggcgcgctgctgctgtatgcg
gcggccacgcaaggccagcaactgcgccacgtgcgcagcctgaaggtcgagtacgagtcc
gaatatatcggcctcgaccccgccacgcgccgcaatcttgaactcacggaaacgctgcgc
ggcaccgaatcgcccacgctgtgctcgctgctcgacacctgctgtacgacgatgggcagc
cgtctgctgcgtcactggctgcaccatccgccgcgtgaagccgccgtggcgcaagcacgt
cagcaggccatcggcgcattgctcgacgcgccgctggcggcaagcgtcgacacgctgcgc
ggcgcgttgcggcagatttccgacatcgagcggattaccgggcgtctggcactgctatcc
gcgcggcctcgcgatctgtcgagcctgcgcgatacgtttatcgccttgcccgaactgcgc
acgcaactcgcggccgtttcgtccaatgcagattcgctggcgcgtatcgacgcgtcgctg
gaaccgccgcaagcgtgcgtcgaacttctcaggcgcgcggtcgcgcaggagccatccgcc
atggtgcgcgacggcggcgtgatcgcgcgcggctacgatgcggaactcgatgaactgcga
gatatttcggagaactgcgggcagttcctgatcgacctcgaaacacgcgaacgggcgcgt
accggcatcggcaatctgcgcgtcgagtacaacaaggtgcacggcttctatatcgaagtc
acacgcggccagaccgacaaggtgccggacgactaccgccgccgtcagacgctgaaaaac
gccgagcgttacatcacgccggaactgaaaacgttcgaagacaaggcgctctccgcacag
gaacgcgcgctggcccgggaacgctcgctgtacgacgcgttgctgcaagcgctgctgcct
tttatcccggactgccagcgggttgccgcagcactcgccgaactcgatctgctggctgca
ttcgctgaacgcgcccgcgcactcgattgggtcgcaccgacgttttcgccggacaccggc
atcgaaatcgagcagggccggcatccggttgtcgaggcccaggtcgagcagttcatcgcc
aacgactgcacgctcacccccgagcgcaaactgctgctgatcaccggcccgaacatgggc
ggtaagtcgaccttcatgcggcagaccgcgctgatcgccttgctggcgtacgtcggcagc
tatgtgccggcacggcgcgcgtcattcggcccgatcgatcgcattttcacgcgcatcggc
gcggcggacgatctggccggcggccgttccaccttcatggtggaaatgaccgaagcggcg
gcgatcctgaacgacgcgacaccgcaaagtctcgtgctgatggacgaaatcgggcgcggc
acatcgacattcgatggccttgcgctagcctgggccatcgcgcggcacctgctctcgcac
aacggctgtcatacgctgttcgccacgcactatttcgagttgacgcagttgcccgccgag
tttccacacgcggccaatgtgcatctgtcggcagtcgagcatgggcacggtatcgtgttc
ctgcatgcggtcaatgaaggtccggcgaatcagagctacggtttgcaggtcgcgcagctg
gccggcgtgccaaacgcagtaatccgcgcggcccgaaagcatctcgcgcatctcgaacag
cagtccgcagcgcaacccgcgccgcaactcgatctgttcgcgacgcctgtgcctatgctc
ctcgaagacgccgaagacgaacgcggcgcgaagccgacagcagcggtatcgccggccatg
caggcactcgccgagcgcctgcgcgccattgatccgaatgatctgcggccccgcgaagcg
ctcgatctgctgtacgaactgcacgagctggccaccgcgccggatgcagatcattga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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