KEGG   Branchiostoma floridae (Florida lancelet): 118426470
Entry
118426470         CDS       T01074                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
bfo  Branchiostoma floridae (Florida lancelet)
Brite
KEGG Orthology (KO) [BR:bfo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bfo03009]
    118426470
Enzymes [BR:bfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     118426470
Ribosome biogenesis [BR:bfo03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    118426470
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 UTP25
Other DBs
NCBI-GeneID: 118426470
NCBI-ProteinID: XP_035691793
UniProt: A0A9J7M0L5
Position
11:complement(5388622..5396171)
AA seq 599 aa
MENTWSDLKLKLSDSTHDTLKELGFQHMTPVQAACIPLFMSNKDVAAEAVTGSGKTLAFV
IPILEILQRRTETLRKHEVGALIITPTRELALQIDEVISAFTKRLPQLSQLLLIGGGNPV
ADIKKYQENGANIIVCTPGRLEDILRRKEDGLNLAGHLKSLEVLVLDEADRLLDMGFEMS
INTILSYLPKQRRTGLFSATQTKEVEALVRAGLRNPVRITVKEKNVAENVQQRTPASLDN
LYMMCRSDEKFNHLVAFLRSHGNEKHMVFFSTCAGVDYFSSALRELLKNTRVMSIHGKMK
QKRNKIFAQFRQAESGVLVCTDVMARGVDIPEVNWVLQFDPPSNASAFVHRSGRTARMGR
EGSAVVFLLPEEDTYIEFIAINQKVTLTQYRPGYEVKDVLPKLRKMALKDRAMYEKAMRA
FVSFVQFYRKHECSLIFRYKDLHIPSLARGFGLLKIPSMPELRGQQFPEFIAADVDISTI
PYKDKQREKLRQQRLREGVTDDKKKKFKPKSSWSDQKEAKGRKQDRRMRKEMAGKRKVEQ
TFKEKEDDLAELARDTRLLKKLKKGKITADSCDKELCWGRGVQERVKMMWKVDHLKGFR
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggagaacacatggagtgatctgaagctgaagctgagcgattcgacccacgacacgctg
aaagagctggggtttcaacacatgacccctgtacaggcagcctgtatcccactcttcatg
tccaacaaagatgttgcagcggaagcagttacaggcagtgggaagaccttggcttttgtc
atccccatcctagagattctgcagcggagaacagagacattaaggaaacatgaggtagga
gctttaatcatcacacccaccagagaactggctctgcagatagatgaggtgatatcagcc
ttcacaaaaagacttccacagctgagtcaacttcttctgattggaggaggaaatcctgtg
gcagacatcaagaaataccaagaaaatggggccaacatcatagtgtgcacacctggaaga
ctagaagacatccttcgcaggaaagaagacggcttaaacctggcaggacaccttaagtct
ttggaagtgctagttctggacgaagcagatagactactggacatggggtttgagatgagc
atcaacaccatcctgtcgtatctgcccaaacagcgcaggacaggtctgttttcagccaca
cagactaaagaggtggaagctttggtcagggcgggcctcagaaacccagtcagaatcact
gtcaaggagaaaaacgtagcagaaaatgtacaacaaagaacaccagcttcattagacaac
ctttacatgatgtgcaggagtgatgagaagttcaaccatttggtagccttccttcgttcc
catggcaacgagaagcacatggtgttcttcagcacctgtgcaggggtagactacttctcc
agcgctctcagagaacttctaaagaacacaagagttatgtccatccatgggaaaatgaag
cagaagaggaacaagatctttgcacagttcagacaggcagaaagcggtgttctggtgtgt
actgatgtcatggccagaggggtggatatcccagaggtcaactgggttctacagttcgat
ccaccaagtaatgcaagtgcctttgtacatcggagtgggcgtacagccaggatgggtcgg
gagggcagtgctgtggtgttcctactgccagaggaggacacttatatagagtttatagct
atcaaccaaaaggttaccctgacacagtacagacctggttatgaggtaaaagatgtgctg
ccgaaactcaggaaaatggccttaaaggacagggccatgtatgagaaggccatgcgggca
ttcgtgtcctttgtccagttttaccgcaaacacgagtgcagccttatcttcaggtacaag
gatctccacatccccagtttagcccgaggatttgggctgttgaaaattcccagcatgcct
gagctaaggggccaacagttcccagaattcattgctgcagatgttgacatcagcaccatt
ccatacaaagacaagcaaagggagaagttaaggcaacaaaggctcagagaaggtgtcact
gatgacaagaagaagaaattcaaaccaaagtcatcctggtctgatcaaaaagaagcaaaa
ggaagaaagcaggacagaagaatgagaaaagaaatggctgggaaaagaaaggtagaacag
acattcaaagaaaaggaggatgacttggctgagttggcacgagatacaaggttattaaag
aagctgaagaagggaaagatcactgcagacagctgtgacaaagagctttgctgggggagg
ggagtgcaggagagagtgaagatgatgtggaaggttgatcatcttaaaggattcagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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