KEGG   Bacteroides fragilis YCH46: BF0057
Entry
BF0057            CDS       T00202                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bfr  Bacteroides fragilis YCH46
Brite
KEGG Orthology (KO) [BR:bfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bfr03016]
    BF0057
Enzymes [BR:bfr01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BF0057
Transfer RNA biogenesis [BR:bfr03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BF0057
 Prokaryotic type
    BF0057
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: BAD46806
UniProt: Q650L8
Position
61547..62248
AA seq 233 aa
MNFKEGEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTG
KATKRIEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHITRELVEKTLKTFVGEI
QQIPPAFSACKVDGARAYDLARKGQEVELKPKLLVIDEIELLECNLPEIKIRVVCSKGTY
IRALARDIGEALQSGAHLTGLIRTRVGDVKLEQCLDPAKFAEWIDQQDVEISD
NT seq 702 nt   +upstreamnt  +downstreamnt
atgaattttaaagaaggagaagtactttattttaataaaccgttgggatggacgtctttt
aaagtcgtggggcacgcccgttaccatatgtgccggcggatgaaagtgaagaaattaaag
gttggacatgcaggtacactcgatcccttggcaacaggggtgatgattgtttgtacaggc
aaggctaccaagagaatagaggagtttcagtatcatacgaaggagtatgtggctaccata
cagttgggcgctactactccgtcttacgatctggaacatgaaatagatgctacataccct
acggagcatattacccgtgagttggtggaaaagacgttgaaaacgtttgttggcgagata
cagcagatacctcccgctttctcggcttgtaaggtagatggtgcacgcgcttacgatttg
gcccgtaaaggccaggaagtggagttgaaaccgaaattgctggtgattgatgagatagag
ttgttggagtgtaatttaccggaaattaaaatacgggtggtttgcagcaaggggacttac
attcgtgcattggcacgtgacatcggagaggctttgcaaagcggggcgcacttgaccggg
ctgatacgtacccgtgtgggagacgtcaagttagagcagtgtctggatccggcaaagttc
gcggaatggatagatcagcaagatgttgagatatctgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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