KEGG   Bombus impatiens (common eastern bumble bee): 100746733
Entry
100746733         CDS       T04362                                 
Name
(RefSeq) probable ATP-dependent RNA helicase kurz isoform X1
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
bim  Bombus impatiens (common eastern bumble bee)
Brite
KEGG Orthology (KO) [BR:bim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bim03009]
    100746733
Enzymes [BR:bim01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     100746733
Ribosome biogenesis [BR:bim03009]
 Eukaryotic type
  90S particles
   Helicases
    100746733
SSDB
Motif
Pfam: OB_NTP_bind Helicase_C HA2_C DEAD AAA_22 AAA_19 nSTAND3 ATPase HA2_N ResIII Flavi_DEAD T2SSE Herpes_ori_bp Helicase_RecD PhoH AAA_30 AAA_14 AAA_23 AAA_16
Other DBs
NCBI-GeneID: 100746733
NCBI-ProteinID: XP_012240856
UniProt: A0A6P3UU31
Position
Unknown
AA seq 1195 aa
MGRKKHNWKARNIAEVEIDNSATKKIPIDIKYREDNYDNCNALVLPNEKRRTKSKVKKVT
TTRLLSKKRRKQLEKVVEKKKKKLRRTELLEELGKVQAPQEELKQYVSLTSVQTKGLKRH
FREMELPVKEHMIKSNNENEDNMSEVPVNAIKGSKKRRMAILKEQKVQDAVSDPNVIGFD
EPSNSESESNSEDNEDREEKDAAETSEDNENIPNKEDNILENNITKSTVGEQEKSIENQT
TISKELLKPQQPIERTPATFVVLERKPEIQAARLKLPVVAEEQAIIEAINENPVVIITGE
TGSGKTTQVPQFLYEAGYAQEKVIGITEPRRVAAISMSKRVAEEMNLTEEEVSYLIRFEG
NVTSETKVKFMTDGVLLKEIQSDFLLTKYSIIILDEAHERSVYTDILIGLLSRIVPLRNK
RKNPLKLVIMSATLRVEEFVENSKLFKTKPPVLTVESRQFPVTIHFNKRTSINYVSDALK
KAIKIHTRLPDGGILIFLTGQREVNYVVCKLRRAFSMKNKKEIANKMKEPQKTNDSSKKE
DDIKNNSDNEDKSDNSDHDDDDDFRCKEAIRYNKLRQKKKVQLPNINLDDYSVIPTDDTH
EDLIGAEDDEEIQLDEDEDEDDDVIDLKTCADAQPLWVLPLYSLLQSDKQARVFEPPPEG
HRLCVVSTNVAETSLTIPNIKYVVDCGRCKTRMYDKVTGVSTYRVCYTSKASANQRAGRA
GRTGPGHCYRLYSSAVFNDQFEQFSQSEIQRKPVDDLLLQMKVMNIDKVVNFPFPTPPDT
VQLQIAEKRLMILGALQQQTSGKEGSYSAKVTPLGRSIAAFPVAPRYGKMLALSHQYDLL
QYTVCMVAALSVQEVLMETLNMDGDSRNKLLQMRRFWAGTGNSLLLGDPMVLIRAVGSAE
YAGTKGRLLPFCEEHGLRHKAIVEIRKLRQQLTNEINLNIEDLNLTINPQMKPPADIEAK
LLRQIVLAGMADQVARKVMPDEVNEDQDKAKWKYAYKTTDMEDPVFIHSSCVLRKICPEW
VVYQEIYETNKMYMRGVTSIEPEWLPKFAPSLCQLGEPLTDPPPRYDPETGKVMCSMAGT
FGRAGWKLPVMDVEYPLSVDGVKWFACFLLEGKVCPKLKQFVPSLLSTPQSINKTWAKLI
PRTQEMTQLLLSRGIMSKGQLLEAWKVDKNFLLSAYQKWLPESAHGHVVLIWPPV
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggggaggaaaaaacataattggaaggcgagaaatatcgcagaagttgaaattgacaat
tctgcgactaaaaagattcctatagatataaaatatcgtgaagataattacgataactgt
aacgcgctagtgctcccaaatgaaaaaagaagaacaaagagcaaagttaaaaaagtcact
actacacggttattatccaagaaacgtagaaaacaattagagaaagttgtagaaaagaag
aagaaaaagttacgtaggactgaacttttagaggaattggggaaagttcaagcaccgcag
gaagaactgaagcaatatgtatctttgactagtgtacaaactaaaggactgaaacgtcat
tttagagaaatggaattacctgttaaggaacatatgatcaaatcaaataatgaaaatgag
gacaacatgtcagaagtacctgtaaatgctattaaaggtagcaagaagagaaggatggca
attttgaaagaacaaaaagtacaggatgctgtttcagatccaaacgtcattggatttgat
gaacctagcaatagtgaatctgaatctaattctgaggataatgaagacagagaggagaaa
gatgcagcagaaacttcagaagataatgaaaatattccaaacaaagaagataatattcta
gagaataatataacaaaaagtactgtgggagaacaggaaaagtcaattgaaaaccaaacc
actataagtaaagaattgttaaaaccacagcagccaatagaaagaacacctgccacgttt
gtagtactggaaaggaaaccggaaatccaagcagctagattaaagttgccagtggtagca
gaagaacaagctataatagaagcaattaatgaaaatcctgtcgtaataatcactggcgaa
acgggaagtggtaaaacaactcaggtaccccaatttctctatgaagctggctatgctcaa
gaaaaggtaattggaataacagaacctagaagagtagcagctatatctatgagcaaacgt
gttgccgaagagatgaatctcactgaagaagaagtttcttatttgattcgttttgagggg
aatgttacatcagagacaaaagtcaaatttatgactgatggcgtattattaaaagaaata
cagagtgattttttactgacaaaatattcgataatcatcctcgacgaagcgcacgaacgt
agtgtgtatactgatattctgataggcttgctatcacgaattgtaccacttcgaaataaa
aggaagaatcctctaaagctcgtaattatgtcagccactttacgcgtagaggaatttgta
gaaaatagtaaattgttcaaaacgaaaccgcctgtattaacagtggaatcgagacagttt
cctgttacgatacattttaataaaaggacaagcatcaattacgtttctgatgctctaaag
aaagccataaaaatacatactcgccttcccgatggtggaatcttaatatttttaacaggg
caacgggaagtaaattatgtagtatgtaaattacgcagagctttttccatgaagaataaa
aaggaaattgcaaacaagatgaaagaaccacagaagactaatgattcttcaaagaaagag
gatgatataaaaaacaacagtgataatgaggacaagagtgacaatagtgatcatgatgat
gatgatgattttcgttgcaaggaagctattcgttacaacaaattacgacaaaagaagaaa
gttcaattaccaaatattaatctggatgattactctgtgattcctaccgatgatactcac
gaagatttaattggcgcggaagatgacgaagaaatacaattagacgaggatgaagatgaa
gatgacgacgtaattgacttaaaaacttgtgcagatgcacaaccattgtgggttttacca
ttatattctctgcttcagagtgacaaacaagcaagggtattcgagccacccccagaagga
caccgtttatgtgtagtatcaacaaacgtagcagaaacttctttaactatacctaacata
aagtatgtagtagactgtggacgttgtaaaacgagaatgtacgataaagtaactggagta
agcacatacagagtctgctatactagcaaggcatccgctaatcaacgagcagggagagct
ggtagaactggtcctggacattgttacaggttgtactcttcagcagtgttcaatgatcag
tttgaacagtttagtcaatcagagattcaaaggaaacctgtggatgatttactgttacag
atgaaagtcatgaatattgataaggttgttaattttccattcccaactccaccagatact
gtacaattacaaattgctgaaaaaagattgatgatacttggagctttacaacaacaaact
tccggcaaagaaggttcctatagtgccaaagtcacgccactcggtcgcagtatcgctgca
tttccagttgctccccgttatggaaagatgttggctctctctcatcaatatgaccttctg
cagtatacagtgtgtatggtggctgcactttctgttcaagaagtattgatggaaacattg
aatatggacggtgattcccgaaataaattgttgcaaatgaggcgcttctgggctggcacc
ggaaatagcttacttcttggcgatccgatggttttaattagggctgtgggaagtgcagaa
tatgctggaactaaaggaagattacttcccttttgcgaagagcatggtttgcgacacaaa
gcaattgtagaaattcgaaagctccgacagcagctaacgaatgaaatcaatttgaatatt
gaggatttgaatctcactattaacccacagatgaaacctccagccgatatagaagccaaa
ttactcagacaaatagtccttgcaggaatggctgatcaagttgcaaggaaagtgatgcca
gatgaagttaatgaagatcaagacaaggctaagtggaaatatgcttacaaaaccacagat
atggaggatccagtattcatacattcctcatgtgttcttcgaaaaatctgccctgaatgg
gtagtttatcaagaaatatacgagacgaataaaatgtacatgcgcggtgttacaagtata
gaacccgaatggctacctaaatttgctccatctctatgtcagcttggagaacctttaact
gatccaccaccaaggtatgatccagaaactggaaaggtaatgtgcagtatggcaggaaca
tttggaagagcaggttggaagttaccagtaatggatgtggagtacccactatctgtagat
ggagttaaatggtttgcatgtttccttttagaaggaaaagtgtgtccaaaattgaaacaa
ttcgttccttcattgttatcgactccccaaagtattaacaagacatgggctaaattaata
ccacgaacacaggaaatgacgcagttattactgtcccgcggaattatgtcaaaaggacaa
ttactagaagcttggaaagtagataaaaatttccttctgtctgcttatcagaaatggtta
ccagaatcagctcatggacacgttgtgcttatttggccacctgtatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (19)   
   Pfam (19)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system