KEGG   Bos indicus (zebu cattle): 109576087
Entry
109576087         CDS       T04792                                 
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
  KO
K15682  ligand of Numb protein X 3/4 [EC:2.3.2.27]
Organism
biu  Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:biu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:biu04121]
    109576087 (PDZRN3)
Enzymes [BR:biu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109576087 (PDZRN3)
Ubiquitin system [BR:biu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    109576087 (PDZRN3)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 Sina_ZnF zf-C3HC4_3 zf-C3HC4_4 zf-TRAF zf-RING_5 TRAF3_RING Prok-RING_4 Tricorn_PDZ CEP104_ZnF zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 109576087
NCBI-ProteinID: XP_019839992
UniProt: A0A6P5DSP5
Position
22:28831876..29122628
AA seq 1061 aa
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGQVVKLQQLPEHLERCDFAPARCRHAGCXQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTQGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAPPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQMVDMGTQT
DITFEHIMALSKMSSPTPPVLDPYLLPEEHPSAHEYYDPNDYIAGIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWLDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDAPAASPPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCADADYLGIPVDECERFRELLELKCQVKSTG
PYGLYYPGSTLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQFREPWM
LHNSGFRNYNTSVDXRRRELADITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RAAEGEGAAEAYGPSPKNLLSITEDSEGGSPNYSPSPKELDPSPAPESKERKPSDEGGGG
SGSPTPGAKLGGSYLPPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVSM
CKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDAVS
ELKMGRYWSKEERKQHVVRAKEQRRRREFMMQSRLDCLKEQQGADDRKEMNILELSHKKM
MKKRNKKIFDNWMTIQELLTHGAKSPDGTRVYNSFLSVTTV
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgctctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgtgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgtctc
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcggccaggtggtcaagctacaacagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcgsccaggtg
ctgctgcggcgagacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaggagggctgcgggctgcccctgacgcaaggcgagcagcgcgccggaggccac
tgttgtgcgcgggccctgcgggcgcacaacgccgcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgagggccggcaagcgcgagaagtccctggtggcg
cagctggccgccgcacagctggagctgcagatgaccgctctgcgctaccagaagaagttc
accgagtacagcgcgcgccttgactcgcttagccgctgcgtggctccgccgcccggcggc
aagggtgaagaaacaaaaagcctgactctagtcctgcatcgggactctggctccttggga
ttcaacatcattggtggccggccrtgtgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagcgggccggcagccaaggacggaggcctgcaaatt
cacgacaggattattgaggtcaatggcaaagacttatccagagcaactcatgaccaggct
gtggaagccttcaagacagccaaggaacccatcgtggtccaggtgttgaggagaacacca
cggaccaaaatgttcactcctccgtcagagtcacagatggtggacatgggaacacagaca
gacatcacctttgagcacatcatggccctgagcaagatgtcctcgcccaccccgcctgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactatgatccaaac
gactacatcgcaggcatccatcaggagatggacagggaggagctggagctagaggaagtg
gatctctacagaatgaacagccaggacaagctgggcctcacggtgtgctaccggacagat
gatgaagatgacattggcatctatataagcgagattgaccctaacagcattgcggccaag
gacgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtagctctgctaaccagtgaagaaaacaagaacttctcattgctaatt
gccaggcccgagctccagctggacgagggctggctggatgacgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcagttcacggcc
agcgtcctgcagcagaagaagcacgaggaagacgggggaactacagacacggccaccatc
ctgtccaaccagcacgagaaagacagcggcgtgggccggacggacgagagcacacgcaat
gacgagagctcggagcaggagaacaacggcgacgatgcccctgcggcctccccgccgctg
gccgggcagaggaagctcacttgcagccaggacaccctgggcagcggcgacctgcccttc
agcaacgagtccttcatctcggccgactgcgccgacgccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgcgagctgctggagctcaagtgccaggtgaagagcaccggc
ccctayggcctctactaccccggcagcaccctggacgccagcaagagcgaccccgagagc
gtggacaaggagctagagctgctcaacgaggagctgcgcagcatcgagctggagtgcctc
agcatcgtgcgcgcrcacaagatgcagcagctcaaggagcagttccgcgagccctggatg
ctgcacaacagcggcttccgcaactacaacaccagcgtggacgkgcgcaggcgcgagctc
gcggacatcaccgagctgcccgagaagtccgacaaagacagctcgagcgcctacaacacc
ggcgagagctgccgcagcaccccactcaccttggagatgtcccccgacaactccctgcgg
agggcggccgagggagaaggtgccgcggaagcttacgggccgtcccccaagaacctgctc
tccatcacggaagattccgaggggggctccccgaactacagcccttcccctaaagagctg
gatcccagcccggctccggagagcaaagagaggaagcccagcgacgaaggtggcggcggc
agcgggagccccacccccggcgcaaagctgggaggctcgtacctgccgcccttcccgcac
tcgccctacaagcacgcccacatccccgcgcacgcacagcactaccagagctacatgcag
ctgatccagcagaagtcggccgtcgagtacgcgcagagccagatgagcctggtgagcatg
tgcaaggacctgaactccgccaaccagtcggagccgaggatggagtggaaggtgaagatc
cgcagcgacggcacgcgctacatcaccaagcgcccggtgcgggatcgcctgttgcgggag
cgcgcgctcaagatccgagaagagcgcagcggcatgaccacggacgacgacgcggtgagc
gagctgaagatggggcgctactggagcaaggaggagaggaagcagcacgtggtgagggcc
aaggagcagaggcggcggcgcgagttcatgatgcagagccggctsgattgcctgaaggag
cagcagggggccgacgacaggaaggagatgaatatcctcgaactcagccacaaaaagatg
atgaagaagaggaataaaaagatatttgataactggatgacaatccaagaactcttaacc
cacggcgcaaaatcgccagacggcactagagtatacaattcattcctctcggtgactact
gtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (30)   

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