KEGG   Bradyrhizobium japonicum E109: RN69_22800
Entry
RN69_22800        CDS       T03509                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
bjp  Bradyrhizobium japonicum E109
Brite
KEGG Orthology (KO) [BR:bjp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bjp02048]
    RN69_22800
Enzymes [BR:bjp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     RN69_22800
Prokaryotic defense system [BR:bjp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   RN69_22800
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD T1RH-like_C Zmiz1_N
Other DBs
NCBI-ProteinID: AJA62852
Position
4794729..4797779
AA seq 1016 aa
MNDVGKPERVTQNRIIALFRDELGYRYLGDWSDRESNSNIEDKLLRDYLAGRGYEPAQIS
AALLKLHTEASNSGRSIYANNQEVYKLLRYGVPVKVEAGKVTETVHLIEWGTPEANDFAI
AEEVTLKGNQERRPDVVLYVNGIAVGVLELKNSRVTIGDGIRQCLSNQQPEFNEWFFSTV
QFVLAGNDTEGLQYGAIGTPEKYFLKWKENEEDNSRFKVDKYLLKLCSKQRLIELMHDFV
LFDGGIKKLPRVHQYFGIKEAQKHVTQHKGGIIWHTQGSGKSIVMVLLAKWILENNPNAR
VAIITDRDELDKQIERVFRDAGEPIYRTSSGRDLMAQLSQAKPRLLCSLVHKFGRRDVDD
FDSFMKEIEAQPSKTVGEVFVFVDECHRTQSGKLHRIMKAMMPSAVFIGFTGTPLLKKDA
QTSLEVFGTYIHTYKFSEAVEDAVVLDLVYEARDIDQRLGSEQRIDQWFEAKTKGLNEWQ
KDELKKKWGTMQNVLSSRSRMEKVVADIVFDFGVKPRLSRERGNAILVASSIFEASKYFA
LFQKTPFKGRCALVTSYNPQAQDVTREETGANTETDKQFIYNTYTELLKDVEAKPGMSKT
ETYEEHAKALFVKEPANMKLLIVVDKLLTGFDAPSCTYLYIDKSMQDHGLFQAICRTNRL
DGEDKDFGYIVDYKDLFKKVENAIAVYTSELDHSAGGVEPEVLLQDRLKKGKERLDNALE
AVTLLCEPVEPPQGELEHIHYFCGNTEVATDLADREPQRAALYKSTAALVRAYAGIADEL
EQAGYTAADVAYLKKQIEYFVKVREIVRKASGETIDLKAYEADMRHLIDTYIQADEPRKI
SLFDNMSLVELIVKSGIADAIASRLGDFKGNKDAIAETIENNVRKKIIKEHLNDPAYYDR
MSALLDEVIANRRAKAIEYEDYLKQVAELAKEVEVGHGGDTPEALDTPGKRALYNNLGRN
EELALRIDEAVKTRRPDAWRGVQPREQQIKRALYDILKDVDEVERIFVIIKAQKEY
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgaacgacgtcggcaagccggagcgggtcacgcagaatcgtatcatcgcgctgtttcgc
gacgagcttggctatcgctatctcggtgattggagcgatcgggagagcaacagcaacatc
gaagacaagcttcttagagactatctggccgggcgcggctacgagcccgcgcagattagc
gcggcactgctcaagctacatacggaggcaagcaacagcggacgcagcatctacgccaac
aatcaggaggtctacaagctcctgcgctacggcgtcccggtgaaggtcgaggctggcaaa
gttaccgaaacggtccacctgatcgagtggggaactcctgaggcgaatgacttcgccatt
gcggaagaagttacgctcaagggcaatcaagagcgccggcctgacgtcgtcctttacgtc
aacgggattgccgtgggcgttctggaactcaagaacagccgcgtcacgatcggcgacggc
attcggcaatgtctttccaaccagcagcccgagttcaacgaatggttcttcagcactgtt
cagtttgtactcgccgggaacgacacggaggggctgcaatatggtgcgattggcacgccg
gagaagtacttcctgaaatggaaggaaaatgaggaagacaatagtcggttcaaggtcgac
aagtatttactgaagctttgtagcaagcagcgcctgatcgaactcatgcacgatttcgtg
ctgttcgacggcggtatcaagaaattgccccgcgtccatcagtactttgggatcaaggag
gcacagaagcatgttacgcagcacaagggcggtatcatctggcacactcagggcagtggt
aagagcatcgtcatggtgctgcttgccaaatggattctcgagaataatccaaacgcccgc
gtagcgatcatcaccgatcgcgacgaactcgataagcagattgagcgcgtcttccgcgat
gcaggagagcccatctatcgcaccagcagcgggcgtgatttgatggcccaacttagtcag
gcgaagccccgactgctctgttctcttgtccacaaatttggacgccgggacgtggacgac
ttcgattccttcatgaaggagattgaagcgcagccgagtaagacagtcggcgaagtgttt
gttttcgtagacgagtgtcatcgtacacaaagtggcaagctgcatcggatcatgaaggcg
atgatgccgagcgccgtatttatcggcttcaccgggactccactgctcaagaaggacgca
cagaccagccttgaggtcttcggcacctacatccacacctacaagttcagtgaagctgtt
gaggatgccgtcgtcctcgatctcgtttacgaggcgcgggacatcgaccagcgccttggg
tcagaacagaggattgaccagtggtttgaggccaagacaaagggcttgaacgagtggcag
aaagacgagctaaagaagaagtggggcacaatgcagaacgtgctcagttcgcgctcgcgc
atggagaaagtggtcgccgacattgtattcgatttcggcgttaagccgcgcctatctcgt
gagcggggcaacgccattctggtcgcctcaagcatctttgaggcgagcaaatattttgct
ctcttccaaaagacgcccttcaagggcagatgcgccctcgtgacttcctacaatccgcaa
gcgcaggacgtaacgcgcgaggaaactggggccaataccgaaacggacaagcagtttatc
tacaatacgtataccgagttgcttaaggacgttgaagcgaagcccgggatgtccaagacc
gagacttacgaggagcatgccaaggcgttgttcgtcaaagaacccgccaacatgaagttg
ctcatcgttgtagacaagctgctaaccggttttgatgcgccgtcttgtacctatctctac
atcgacaagtcgatgcaggatcacggcctgtttcaggccatatgtcgtactaaccgcctc
gatggtgaggacaaagattttggttacatcgtcgattacaaagacctgttcaagaaggtc
gagaacgccatcgctgtgtacacctctgaactcgaccatagcgcgggtggggtcgaacct
gaggtgctgcttcaagatcgcctcaagaaagggaaggagcgccttgacaacgcgcttgag
gcggtcacgttgctgtgcgagccggtagagccgccgcagggtgagcttgagcatatccat
tatttctgcggcaacactgaagtggccaccgaccttgcggatcgagagccgcagcgtgcc
gccctttacaagtccacggccgcgctggtcagggcgtatgccggtatcgccgacgagctg
gaacaggccggttacaccgccgccgatgttgcttacctaaagaagcagatcgaatacttc
gtgaaggtccgcgagattgtcaggaaagcgagcggtgaaaccatcgatctcaaggcgtat
gaggccgacatgcggcacctcatcgacacctatatccaggcagacgagccgcgaaagatc
tccctgtttgacaacatgagcctcgtcgaactgatcgttaagtctggcattgcggatgct
atcgcttcgcggcttggtgattttaaaggaaacaaagatgcgatcgcggaaacgatcgag
aacaacgtccgcaaaaagatcattaaggagcacctgaacgaccccgcttactatgatagg
atgtctgcgctgctggacgaggttatcgctaatcgcagggctaaagcgatcgagtatgaa
gactacctcaagcaagttgccgaactcgcgaaagaggtcgaagtcggtcatgggggtgac
acgccggaagcgctcgacacgcccggcaagcgcgccctctacaacaatctaggacggaac
gaagagctggcgctgcgcattgacgaagccgttaagacgaggcgcccggatgcttggcgt
ggcgtccagccgcgagagcagcagatcaaaagggctctctacgacatactgaaggatgtc
gacgaggttgagcggatcttcgtgattatcaaagctcagaaggaatattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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