KEGG T01345: BBMN68

Bifidobacterium longum subsp. longum BBMN68: BBMN68_1652

Entry

BBMN68_1652       CDS       T01345

Symbol

truB

Name

(GenBank) TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

blb Bifidobacterium longum subsp. longum BBMN68

Brite

KEGG Orthology (KO) [BR:blb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:blb03016]
    BBMN68_1652 (truB)
Enzymes [BR:blb01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BBMN68_1652 (truB)
Transfer RNA biogenesis [BR:blb03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BBMN68_1652 (truB)
Prokaryotic type
    BBMN68_1652 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C TruB_C_2

Other DBs

NCBI-ProteinID:

ADQ02693

Position

2049179..2050342

AA seq 387 aa
MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFT
VLDIRSGFVAGEQAAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGY
LTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLD
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA

NT seq 1164 nt +upstreamnt +downstreamnt
gtgcttcatacaacacccagcggtctgctcatcatcgacaagccgcaaggcgtgaccagc
ttcgacgccgtcgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacacgactg
ctcaacgccatcgtggcgcatgacaaaacctacgaggccaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggcgaggtgcttgtcgatgacgaagcccgttcccgctgg
caaacgctatcagcgcagctgactgagggtggccagagcggcgaaccaacggcgttacca
actgcctcatggcaagacctgctcacacgcaccatcgccaccaatttcaccggcgatatc
gaacaagtccccaatacgttctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggatgtggaactcaaaccccgcccggtcaccatcagcgaattcacc
gtgctggatatccgcagcggattcgtagcaggggagcaggccgctgaaccattgcgggaa
gacgcgaacacgggagcgattcccgcacttgatgttgacgtgcggatcagctgttcatcg
ggcacctatatccgcgcgctcgcccgcgacctcggcaaagaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgatgccagcgga
cttatcgctcctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattggac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgcccttacc
atggaacaggccgctcgaggtgcgatgccggcgcttgacatcactcctgaggaggccagc
gaattacgcttcggccgccgtattgagcgtacaatcagcgagcccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgcaaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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