KEGG   Brevibacterium aurantiacum: BLSMQ_3226
Entry
BLSMQ_3226        CDS       T04775                                 
Name
(GenBank) DNA repair helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
blin  Brevibacterium aurantiacum
Pathway
blin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:blin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BLSMQ_3226
  09124 Replication and repair
   03420 Nucleotide excision repair
    BLSMQ_3226
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:blin03021]
    BLSMQ_3226
   03400 DNA repair and recombination proteins [BR:blin03400]
    BLSMQ_3226
Enzymes [BR:blin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BLSMQ_3226
Transcription machinery [BR:blin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     BLSMQ_3226
DNA repair and recombination proteins [BR:blin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     BLSMQ_3226
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: AOP54928
UniProt: A0A1D7W8H8
Position
3512804..3514483
AA seq 559 aa
MPSEVTSAWEEAGTHMNGPLIVQSDRTVLLESGHPLAVEAAVAIAPFAQLSRTPEYIHTY
TITPLGLWNARASGHDAESVVDVLLEFAKYPVPHELLVDIVDIMDRFGVLTLVDNPIHGL
TLTSSDTDLLASLISQPDLVGKFGKSLDAESVLVHPSERGELKHALLQLGHPVSDHAGYV
DGEAHEIALSDDAHGGQWHLRDYQKEAIDHSLSGESGVVVLPCGAGKTIVGVATMSRVQT
TTLILVTNSVAARQWKDEILARTSLTEDEVGEYSGSTKEIRPITIATYQVLTTRRKGSYL
HLELLDAKDWGLVIYDEVHLLPAPIFRLTASLQARRRLGLTATLVREDGREDEVFSLIGP
KQYEVPWKELERMGYIATASCHEVRVRLDGGTRTAYARADGEDRYRLAATSDAKLPIVRE
LVADHPKAQILVIGQYLDQLEEVGRELDAPVLTGQTPESQRQELFRDFRSGAIPVLVVSK
VANFSVDLPAASVAIQVSGAFGSRQEEAQRLGRILRPKEDSGSATFYTVVAADTVDEHFA
AQRRRFLTEQGYSYDIEVR
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtgccctcggaagtcacctcggcgtgggaagaagcaggaacacatatgaacggtccgttg
atcgtgcagtccgaccggactgtgctgttggagtcggggcatcccctggccgtcgaggcg
gctgtggcgatcgcacccttcgcgcagctgtcgcggaccccggaatacatccacacgtac
acgatcaccccgctggggctgtggaacgcccgggccagcggccatgacgcggagtccgtc
gtcgacgtcctcctcgagttcgcgaagtacccggtgcctcatgagctgctcgtcgacatc
gtcgacatcatggaccgcttcggcgtgctcaccctcgtcgacaatccgatccacggactg
accctgacctcgagcgacaccgatctgctcgcctcgctcatcagccagccggatcttgtg
ggcaagttcggcaaatccctcgatgccgaatctgtcctcgtccatccttcggagcgcggt
gagctcaagcatgcgctgctgcagctgggtcatcccgtctccgaccatgccggctatgtc
gacggtgaggcccacgagatcgccctgtccgatgatgcccatggcgggcagtggcatctg
cgcgactatcagaaggaggcgatcgaccactccctcagcggcgagtccggcgtcgtcgtt
ctgccctgcggtgctggcaagaccatcgtcggagtggccacgatgtcgcgggtgcagacg
acgacgctgatcctcgtgacgaactccgtggccgctcggcagtggaaggacgaaatcctc
gcgcgcacctcgctgaccgaggacgaggtcggtgagtactcggggtcgacgaaggagatc
cggccgatcaccatcgctacctatcaggtgctgaccacgcgccgcaaaggctcctacctg
catctcgagctccttgatgccaaggattggggtctggtcatctatgacgaggtccacctg
ctgccggcaccgatcttccgtctgaccgcgagcctgcaggccaggcggcggctcgggctt
acggccaccctggtccgtgaggacggacgtgaggacgaggtgttctccctcatcgggccc
aagcagtacgaggtgccgtggaaggaactcgagcgcatgggctacatcgccaccgcctcc
tgccacgaagtccgggtccgcctcgacggaggaacccgcaccgcctatgcccgtgccgat
ggtgaggatcggtaccggctggctgcgacgtcggatgcgaagctgccgatcgtgcgtgag
ctcgtcgccgaccacccgaaggcgcagatcctcgtcatcggccagtacctcgatcagctc
gaagaggtcgggcgcgaactcgacgctcctgtgctgaccggtcagacgccggaatcgcag
cgccaggagctcttccgcgacttccggtccggcgcgatcccggttctcgtggtgtcgaag
gtcgcgaacttctccgtcgacctgccggcggcatccgtggcgatccaggtctcaggtgcc
ttcggctcccggcaggaggaggcccagcgcctggggcggattctgcggccgaaggaagac
tccggatccgcgacgttctacaccgtcgtcgccgccgacaccgtcgacgagcacttcgcc
gcccagcgtcgtcgcttcctcaccgagcagggctacagctacgacatcgaggtccgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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