KEGG   Bombyx mandarina (wild silkworm): 114245778
Entry
114245778         CDS       T05882                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:5.6.2.7]
Organism
bman  Bombyx mandarina (wild silkworm)
Pathway
bman03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bman00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114245778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bman03041]
    114245778
Enzymes [BR:bman01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     114245778
Spliceosome [BR:bman03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    114245778
 Complex C
   U5 SnRNP specific factors
    114245778
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 114245778
NCBI-ProteinID: XP_028033852
UniProt: A0A6J2JYG1
Position
Unknown
AA seq 811 aa
MARDRSPERRRSRSRDRRDRDRYDERESYREKVKRRDRSKSPKKDADKARSPSRKDRDRS
RSPLRKERGRSRSPKKRDGKDKDRRYEDKEKSRSKKEDEEEDTADMKKEDESIDKKPIKK
EPLSLEELLAKKKAEEEARSKPVFLTKEQRAQIALEKRRQEVEAIRANTDKPQVTIDLTG
PSRREEDKRHREEREKDREKERREERERKYEERKAYSDRREPKKDNEETSKTKDKEREEE
AIKARYLGIVKKKRRVRRLNDRKFVFDWDASEDTSNDYNVLYKERHQVQFFGRGHIAGID
IKSQKKDHSKFYGNLLEKRRTELEKEQEKLRLKKVKKKEDKQKWDDRHWSEKDVDEMTER
DWRIFREDYNITLKGGKIPNPIRSWKEAPLHTDIMDIINKVGYKSPTPIQRQAIPIGLQN
RDIIGVAETGSGKTLAFLIPLLTWIQSLPKSERMEDADQGPYAIILAPTRELAQQIEEET
NKFGIPLGITSVVVVGGLSREEQGFKLRLGCEIVIATPGRLIDVLDNRYLVLNRCTYVVL
DEADRMIDMGFEPDVQKILEYMPVSNIKPDSDAAEDASVLLANYNTKKKYRQTVMFTATM
PPAVERLARSYLRRPAIVYIGSVGKPVDRTEQIVYMIGENEKRRKLTEILQRGVEPPIII
FVNQKKGADVLAKGLEKLGFNACTLHGGKGQEQRDFALASLKGGAKDILVATDVAGRGID
IKDVSMVINYDMAKTIEDYTHRIGRTGRAGKTGKAMSFVTKEDSALFYDLKQVLLASSVS
TCPPELMNHPEAQHKPGTVVTKKRREEMIFA
NT seq 2436 nt   +upstreamnt  +downstreamnt
atggccagagacagaagtcctgaacggcggaggtcaagatcacgagatagaagagatcgg
gatcgttacgatgaacgcgaatcatatcgtgaaaaagtaaagcgcagggacaggtctaaa
agccctaaaaaagatgcggataaagctcgaagcccttctagaaaagatcgcgatcgttcc
aggagtccgctacgtaaagaacgcggccgttcgcgcagccctaagaagcgtgacggcaaa
gacaaagatcgacgttacgaagacaaggaaaagagtagatcaaaaaaagaagatgaagag
gaagacactgcagacatgaagaaagaggatgaatccatagataaaaaaccaattaaaaaa
gagcctttgtccttagaagaactacttgctaagaaaaaggctgaggaagaagcccgcagt
aagccagtatttcttaccaaagagcaacgagcacagatagctttggagaaacggcgtcaa
gaagtagaagctataagagctaatactgataagcctcaagtcactattgatttaacaggt
ccgtcaagacgtgaagaagataaaaggcacagagaagaacgtgaaaaagatagagaaaag
gaacgtcgagaggaacgggaaaggaaatatgaagagaggaaagcctattcagatcgtcga
gaaccaaaaaaagataatgaagagacatctaaaacaaaagataaagaaagagaagaagag
gctattaaagctcgttacttaggtatagtaaagaaaaagcgtagagtaagacggctgaat
gacaggaaatttgtttttgactgggatgcgtcagaagatacatcaaatgattataatgtt
ttgtacaaagaaagacatcaagtacaattctttggtcgtggacacattgctggtatagat
atcaagtctcaaaagaaagaccatagcaaattctatgggaatcttttagaaaagcgcaga
actgagttagagaaagaacaagaaaaactacgcttgaagaaagtgaaaaagaaggaagac
aagcaaaagtgggatgatagacactggtctgagaaagatgtggatgagatgacagagcgt
gattggaggatattcagggaagactacaatattaccttaaaaggaggtaaaattcctaac
cctatacgttcttggaaggaagcgcccttgcatactgacattatggacataatcaacaaa
gttggatataagagcccaactcctattcaaaggcaggctattccaattggattacagaac
cgtgacattattggtgttgctgaaactggttccggtaaaacattggcattccttatacca
ttacttacatggattcaatctctgccaaagagtgaacgtatggaagatgctgaccaagga
ccttatgctataattttagctccaacacgtgaattggctcaacaaattgaagaagaaact
aataaatttggtattcctcttggtatcacatcagtagtggttgttggaggtttatctcgt
gaagaacaaggttttaagctgaggttaggctgtgagattgtcattgccactcccggtcgt
cttattgatgtcttagacaacagatatttagtactaaaccgttgtacctatgttgttctt
gatgaagctgaccggatgattgatatgggttttgaaccggatgttcaaaaaatcctggaa
tacatgcctgtatcgaacataaaacctgatagtgatgcagctgaagatgcttcagtattg
cttgccaattataacacaaaaaagaaataccgacaaactgtgatgtttacggcaacaatg
cctccggctgtagagcggctggctagaagttatctcagaagaccggctattgtatatatt
ggatctgtaggaaaaccagtagacagaactgaacaaatagtctacatgataggcgagaat
gaaaaacgtagaaaacttacagagattttgcagcgtggtgtcgaaccacccattattatt
tttgttaaccagaaaaaaggtgcagatgttcttgcaaagggacttgaaaaacttggtttc
aatgcctgtacgctgcatggtggtaaaggccaagaacaacgtgactttgcacttgccagt
ctcaaagggggcgctaaagatatcctcgtggcgacagacgtggcaggtcgtggtattgac
attaaagatgtcagtatggtcattaattacgatatggcgaagactattgaagactacact
catcgtatcggccgtaccggtcgtgcaggaaaaactggtaaagctatgtcctttgttaca
aaagaagactccgcattgttctatgatctgaagcaggttttgttggcaagctccgtatct
acatgtccaccggaacttatgaaccaccctgaggctcaacataagccagggacagtcgta
acaaagaaaagacgtgaagagatgatattcgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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