KEGG   Halobacteriovorax marinus: BMS_0195
Entry
BMS_0195          CDS       T01659                                 
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
bmx  Halobacteriovorax marinus
Pathway
bmx03420  Nucleotide excision repair
bmx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BMS_0195 (pcrA)
   03430 Mismatch repair
    BMS_0195 (pcrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmx03400]
    BMS_0195 (pcrA)
Enzymes [BR:bmx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BMS_0195 (pcrA)
DNA repair and recombination proteins [BR:bmx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BMS_0195 (pcrA)
   MMR (mismatch excision repair)
    Other MMR factors
     BMS_0195 (pcrA)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 PcrA_UvrD_tudor AAA_12 AAA_11
Other DBs
NCBI-ProteinID: CBW25127
UniProt: E1X2T2
Position
200836..203094
AA seq 752 aa
MNRMDLSGLNEQQRKAVLRTDGPVMILAGAGSGKTKTLVTRISYLLEELHVSPYQVLALT
FSNKAAREMRDRIGSMVEADVGALQITTFHAFCARILRSEANYLGLSRNFTIYDTSEQKA
VVKAILGRHGISTKEVSPFEVLYYMDDLKNHGHYLGRDISECDYEIDQGDSFFTFYQEYE
AELHKANAVDFGSLITGVIQLFEKFPDVLKRYQERFKYLLVDEYQDTNRAQFELVKMLSE
QNRNVCVVGDEDQSIYSWRGADIRNILDFEEVFSDAKILKLEQNYRSSKNIIEAATHVIA
RNSQRKGKDMWTNNPHGEDIDIVECFNDKTEGEFVAQKIRELSKEGHPFKEMAVFYRTNT
QSRLIEDNLRKNNIPYRVVGGVKFYERKEIKDLIAYMRIVVNEKDSLALSRIINVPARGI
GATTLRKLENEAVTNNCSLWEMLDTVVANPENYKHIRLSAKVKSALSHLVTLINEVRVSV
DNVAPSSLYEKLLHESGYWDFLKSSKDYESQARMENLEELQNAIVQYEESNKSPSLLNFL
ETITLDTSGEGDNPENTGEVSLMTIHGAKGLEFLHVFVTGAEENIFPSYKSLENGETAIE
EERRLFYVAMTRAMEKLYITFAQGRMLFGQLRFNGPSRFLHEIPNKYYQWRKPNGSTMSS
GNSWDSEDDFDDYNQDQSYDEGEAVYQVASFKEEKSAPKAKFPKGVKIIHSLYGEGTVLD
SSGYGAEEKVSIKFSDGARKKFLVKFAPLVLA
NT seq 2259 nt   +upstreamnt  +downstreamnt
ttgaatagaatggatttaagtggattaaacgagcaacaaagaaaagcagttcttagaaca
gacgggccagtgatgatcttggccggtgcgggttcaggaaaaacaaaaactctagtcaca
agaatttcttatttactagaggagttgcacgttagtccatatcaagttctagcgctaaca
ttctctaataaagccgcacgtgaaatgagagaccgaattggttctatggttgaagctgat
gttggagcattacagatcacaacttttcacgcattctgcgcaagaatattaagaagtgaa
gctaattacctagggctatctagaaattttactatctatgatacttcagaacaaaaggcc
gttgtaaaggccatactaggtagacatggaatatcaactaaagaagtgtctccttttgag
gtgctctactatatggatgaccttaaaaatcatggtcattatcttggaagagatatttca
gagtgcgattatgaaattgaccagggagactcgttttttactttctatcaagagtatgag
gcggaacttcacaaggccaacgctgttgactttgggagtcttatcactggtgttattcaa
ctctttgaaaaatttccagatgttttaaaacgctatcaagaaagatttaagtatcttctt
gtagatgagtatcaagatacaaatagagcgcaatttgaattagtgaaaatgcttagtgag
cagaatcgtaatgtctgtgttgttggagatgaggatcagtctatctactcatggcgtgga
gcggatattagaaatattttagactttgaagaagtcttctctgatgcaaaaattttaaag
ttagaacaaaactatagatcgagtaagaatattattgaagcggcaactcatgtcatcgca
agaaattcccagagaaagggaaaagatatgtggactaataatccacatggtgaagatata
gatatcgttgaatgttttaatgataaaactgagggcgagtttgtggcccaaaaaattcgc
gaactctcaaaggaaggtcatccatttaaggaaatggccgttttttacagaacaaatact
cagtcgagactcatagaagataatttaagaaagaataatattccctaccgagtcgttgga
ggggttaagttttacgaacgaaaagaaattaaagatctcatcgcctatatgagaattgtg
gttaatgagaaagactctctggccttgagtcgaatcatcaatgttcctgctagaggaatt
ggcgcaacaacacttagaaagcttgagaatgaagctgttactaataattgctcattgtgg
gaaatgctcgatactgtcgtggccaatcctgagaattataaacatattcgcctctctgct
aaggttaagtctgcacttagccacttagtgactcttattaatgaggtaagagtttctgtg
gataatgttgctccaagctctttatatgagaaattattgcatgagtctggatactgggac
tttcttaaatcgagtaaggactatgagtctcaggcaagaatggagaacttagaagagctt
caaaatgcaatcgtgcagtacgaagagtctaataaatctccctctctactaaatttcttg
gaaaccattacattggatacttctggagaaggggataaccctgaaaatactggtgaagtt
tctttaatgacaattcacggagcgaaggggcttgaatttcttcacgtctttgtgacggga
gctgaggaaaatatttttccaagttataagagtcttgaaaatggtgaaacagcaatagaa
gaagagagaagactattctatgtggccatgacaagggccatggaaaaactatatataaca
tttgctcagggaagaatgctctttggccagttaaggtttaatggaccaagtcgattccta
catgaaattcctaataagtactaccaatggcgtaagcctaatggatctacaatgtcctct
ggaaactcttgggatagtgaagatgattttgatgactacaatcaagaccaatcctacgac
gaaggtgaggcagtctatcaagtggcttcgtttaaagaagagaagagtgctccaaaggcc
aagttccctaaaggtgttaaaattattcactcactctacggtgagggaactgtcttagat
tcttctgggtatggtgctgaagagaaggtatcaattaagttctcagacggtgccagaaag
aaattcttagttaaatttgcgccattagttcttgcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (56)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (73)   

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