KEGG   Brassica napus (rape): 106428449
Entry
106428449         CDS       T04128                                 
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
  KO
K03093  RNA polymerase sigma-I factor
Organism
bna  Brassica napus (rape)
Brite
KEGG Orthology (KO) [BR:bna00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106428449
Transcription machinery [BR:bna03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     106428449
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 Response_reg_2 Sigma70_r4_2 GerE
Other DBs
NCBI-GeneID: 106428449
NCBI-ProteinID: XP_013724655
UniProt: A0A816ISW0
Position
C9:4173962..4177422
AA seq 503 aa
MGVVFISSSAARSPLGLSTDLLTHRSTLKKLPSVVAFKADESTNSSLIVPPEQEKQKEKR
VVTRRKPPKDQNSAPSCSLGVDYNEAAARLESIYKLSPPATSLEEDVIDASKGKVSRRRK
RKESDGGEEKKVVVRSNVKKEKRLNLDKRIALKRNIQEKPVIVSAQKKVTKRQQEEEKIE
RLVRDYSASNDVVSLDWKKMKMPPVLSSTEHTWLFKLMQPMKALLEVKDELQKSLGREPR
EAEIAGEINMSVAEVKMKIKVGKAARNKLIKHNLRLVLFVMNKYFQDFTNGPKFQDLCQA
GMRGLITAIDRFEPKRKFRLSTYGLFWIRHAIIRSMTTSNFTRVPFGLESVRVEIYKAKM
ELLFELGRLPTDEEVVERLKISPERYHEVLRAAKPVYSLNTKHSVTQEEFINGITDVDGV
GADNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLNISREMVRK
HEVKALMKLKHQARVDYLRQYII
NT seq 1512 nt   +upstreamnt  +downstreamnt
atgggagttgtgtttatttcaagctcagctgcaagatctcctctcgggttaagcaccgat
cttttaacacaccggtccacactcaaaaagctgccatccgttgttgcgttcaaagcagat
gagtccaccaactcatctttgatcgttcctcctgaacaagagaagcagaaggagaagaga
gttgtaactaggagaaagccccctaaagaccaaaactcggctccttcgtgttccttggga
gtggattacaatgaagctgctgctagactagaaagcatttacaagcttagccctcctgca
acatccctcgaggaggatgttatcgatgcttctaaagggaaagtttcacggaggaggaag
aggaaagagagtgacggcggcgaagagaagaaagtagttgtgaggagtaatgtgaagaag
gaaaagagactgaatcttgataaacggatcgcgttgaagagaaacattcaagagaaacca
gttattgtctctgcgcagaagaaagtaacaaagaggcagcaagaggaggagaagatcgag
aggctcgtgagggactactcagcttctaatgatgttgtcagcttggactggaagaaaatg
aagatgcctcctgttctttcttccacagaacatacttggttgtttaagttgatgcaacct
atgaaggctcttcttgaagtgaaagatgaactgcaaaagagtctgggaagagagcctagg
gaagctgaaatagctggagagatcaatatgagcgtggctgaagtgaaaatgaaaatcaaa
gttggtaaagctgcaaggaacaaacttattaaacacaatctccgtcttgtcctgtttgtc
atgaacaaatactttcaagatttcaccaacggaccaaagttccaagacctctgtcaagcc
ggtatgagagggcttatcacagctattgaccggtttgaaccaaaaaggaagtttcgtctt
tccacttatggtttgttttggattagacacgccatcatacggtctatgacaacctcaaac
ttcactcgtgtcccatttggacttgaatcggttagagtggagatctataaagcaaagatg
gagctattgttcgagctgggaagactacctacagacgaagaggttgttgagagactcaag
atatcacctgagaggtaccatgaagtgttgagagccgcgaaaccggtttactcgctgaac
acaaaacattcggttactcaagaagagttcatcaatggaatcacagatgttgatggtgta
ggagctgataacaggagacaacctgctcttctcaggctagctcttgacgatgtgctggat
tcattgaagcctaaagagagtcttgttatccgacaaagatacggtcttgatgggaaagga
gacaggacactaggagagatagctggaaatctcaacatctccagagaaatggtgaggaaa
catgaagtcaaggccttgatgaagctcaagcatcaagctcgtgttgattacctccgtcaa
tacatcatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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