KEGG   Brenneria nigrifluens: EH206_03345
Entry
EH206_03345       CDS       T06070                                 
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
bng  Brenneria nigrifluens
Brite
KEGG Orthology (KO) [BR:bng00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bng03021]
    EH206_03345 (rapA)
Transcription machinery [BR:bng03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     EH206_03345 (rapA)
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 Mobilization_B
Other DBs
NCBI-ProteinID: QCR03330
Position
complement(731447..734350)
AA seq 967 aa
MPFTLGQRWISDTESELGLGTVIAVDNRMVTLLFPASDENRLYSRSDAPITRVMFNPGDI
VTSHEGWQLKVDAVGDENGLLVYRGQRLDNEAPAELREIMLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQHEQALQQWGGLRGMRASLIPHQLHIAYEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SDNPFETEQLVICSLDFVRRDAQRFEQLVNADWGLLVVDEAHHLSWSEEAPSPEYQAVER
LAANIPAVMLLTATPEQLGQQSHFARLRLLDPNRFHDYREFVAEQRQYRPVADAVTLLLA
GEKAKTPELNVLSELLGEQDIEPLLKAINSDGEDNPRARQELIAMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPAQYQTAIKVSAIMGANKAPEARARDMLYPEQIYQQLEGND
ATWWNFDPRVEWLLNYLTANRHEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFATEEEGAQVLICSEIGSEGRNFQFASQLIMFDLPFNPDLLEQRIGRLDRIG
QTQQIQILIPYLENTAQALLVRWYHEGLDAFEHTCPTGRAIYDAHYAQLIERLTAPGERQ
GLDEFIRLCRQQHEQFKQQLEQGRDRLLEMHSNGGEQAQRLAQGIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDREQALSREDAQFISWEH
PLIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKNLQLTRFLPPTPV
RLLMDRKGADLAGQVEFESFNRQLSAVNRHTSSKLVNAVQADVHAMLKQAEALVEEQARQ
MIADAQQQADQQLRRELERLEALKAVNPNIRDDELSALENQREQVLRNLHQANWRLDAIR
LVVVTHQ
NT seq 2904 nt   +upstreamnt  +downstreamnt
atgccttttacacttggtcagcgctggatcagcgatacggaaagcgaacttggattgggt
acggtgattgcggtcgacaaccgcatggtcaccctgcttttccctgccagcgatgaaaac
cgactctattccagaagcgatgcgcccatcacccgggtgatgttcaaccccggcgatatc
gtcaccagccacgaaggctggcagctgaaagtagacgccgtcggcgatgagaacgggctg
ctggtgtaccgcggccagcgtctggataacgaggccccggccgaactgcgcgaaatcatg
ctggatagcaagctgacgttcaacaagccgcaggatcgcctgttcgccggccagatcgat
cgtatggatcgcttcgccctgcgctaccgcgcgcgtaaacatcagcacgaacaggcgctg
cagcagtggggtggcctgcggggcatgcgcgccagcctgatcccgcatcagctgcatatc
gcctacgaagtcggacagcgccacgcgccgcgcgtgctgctggcggatgaggtcggcctg
gggaaaaccatcgaggccgggatgatcattcaccagcaactgctggccggccgcgccgag
cgggtgctgatcgtagtgccggaaaccctgcagcaccaatggctggtggagatgctgcgc
cgcttcaacctgctgttctcgctgtttgacgacgaacgctacgcggaagcgaagctggac
agcgacaacccctttgaaaccgagcagttggtcatctgttcgctggacttcgtacggcgc
gatgcgcagcgtttcgaacagttggtcaacgccgactggggcctgctggtggtggatgag
gcgcatcatctctcctggagtgaagaggcgcccagccccgaatatcaggcggttgaacgt
ctggccgccaatattccggcggtgatgctgcttaccgccacgccggaacagctgggtcag
caaagccatttcgcccgtttgcgcctgctcgatccgaatcgcttccatgactatcgggaa
ttcgtcgccgaacagcggcaataccgcccggtggccgatgcggtaacgctgctgctggcg
ggagaaaaagccaaaacgcctgagcttaacgtgctgagcgaactgctcggcgagcaggat
atcgaaccgctgctgaaagcgattaacagcgacggcgaagacaacccgcgcgcgcggcag
gaactgatcgccatgctgatggatcgccacggcaccagccgtgtgctgttccgtaatacc
cgtcagggggtgaaaggcttcccgcagcgtattctgcatcaaatccgcctgccgctgccg
gcccagtatcagacggcgatcaaagtgtccgccattatgggcgccaacaaagcgcccgaa
gcccgcgcgcgcgatatgctctacccggagcagatttatcagcagttggaagggaacgac
gccacctggtggaatttcgatccgcgcgtcgagtggctgctcaattatctgaccgccaac
cgccacgaaaaagtgctggtaatctgcgcgcaggccgccaccgcgctgcagctggaacag
gtgctgcgcacccgcgaagccattcgcgccgccgttttccacgaaggtctgtccattctt
gagcgcgatcgggcggccgcctatttcgccaccgaggaagaaggcgcgcaggtgctgatc
tgctcggagatcggttccgaaggccgcaacttccagttcgccagccagctgatcatgttc
gatctgccgttcaaccccgatctgctggaacagcgcatcgggcggttggatcgcatcggc
cagacgcagcagatccagatcctgatcccgtatctggaaaataccgcccaggcgctgctg
gtgcgctggtatcacgaagggctggacgctttcgagcacacctgcccgacgggccgcgcc
atctatgacgcccactacgcgcagctgattgaacgactgaccgcgccgggcgagcggcag
ggactggatgagtttatccgcctctgccgccagcagcacgaacagtttaaacagcagctt
gagcaagggcgcgaccgactgctggaaatgcattccaacggcggcgaacaggcgcagagg
ctggcgcagggcatcgccgaacaggataacgacgttaatctggtcacctttgcgcttaat
ctatttgatatcgtgggcattaatcaggaagatcgcagcgataacctgattattctgacg
ccgtccgaccatatgctggtgcccgatttccccggcttgccgcaggacggctgcaccatc
accttcgatcgcgaacaggcgctgtcgcgcgaagacgcgcagtttatcagttgggagcat
ccgctgatccgcaacgggcttgatttgatcctctccggcgataccggcagttgcgccgtg
tcgctgttgaagaacaaggcgctgccggtgggcacgctgctggcggagctggtctacgtg
gtggaggcgcaggcgccgaaaaatttacagttgacgcgcttcctgccgccgacgccggtg
cgcctgctgatggaccgcaaaggcgccgacctggccggacaggtggagtttgaaagcttt
aaccgccagctcagcgccgtcaaccgtcatacctcgagcaagctggtgaacgccgtccag
gcggacgtgcacgccatgctcaaacaggcggaagcactagtggaagaacaggcgcgccag
atgatcgccgatgcccagcagcaggccgaccagcagttgcgccgcgagttggaacgtctg
gaggcgctcaaggccgtcaacccgaatatccgcgacgatgaattgagcgcgctggaaaat
cagcgcgagcaggtgttgcgtaaccttcatcaggcaaactggcgtctggacgccattcgc
ctggtggtggtcacccaccagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (14)   

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