KEGG   Bordetella pertussis B1917: B1917_3510
Entry
B1917_3510        CDS       T03638                                 
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
bpet  Bordetella pertussis B1917
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bpet03009]
    B1917_3510 (rimO)
Enzymes [BR:bpet01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     B1917_3510 (rimO)
Ribosome biogenesis [BR:bpet03009]
 Prokaryotic type
  ribosomal protein modification factors
   B1917_3510 (rimO)
SSDB
Motif
Pfam: TRAM_2 Radical_SAM UPF0004 CLP1_P TRAM
Other DBs
NCBI-ProteinID: AIW93721
Position
complement(3721724..3723043)
AA seq 439 aa
MSSPKVGFVSLGCPKALVDSERILTQLRTEGYEVTPEYNDADVVVVNTCGFIDSAKAESL
EAIGEAIAENGKVIVTGCMGVEESVIRQVHPSVLAVTGPQQYEEVVRAVHGVAPPRQDHN
PYLDLVPPQGVKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLSEAERLVR
AGVKELLVISQDTSAYGVDIKYRSGFWNGRPVKTRMTELCAALSELGVWTRLHYVYPYPH
VDEVIGLMADGKVLPYLDIPFQHASPRILRAMKRPAFEDKTLARIKRWREECPDLTLRST
FIVGFPGETEEDFQYLLDWMSEAQLDRVGCFQYSPVEGAPANTLDNPVPDEVKQERWERF
MEHQQAISTARLSTRVGREIDVLIDSVDEEGAVGRSSADAPEIDGCVYVDSEQPLKAGDM
VRVRVTDSDEYDLWGERIA
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgtcttcccccaaagtcggcttcgtcagcctcggctgtcccaaggccctggtcgattcc
gaacgcatcctgacccagcttcgcaccgaaggctacgaggtcacgcccgaatacaacgac
gccgatgtcgtggtggtcaacacctgtggcttcatcgacagcgccaaggccgaatcgctc
gaagcgatcggcgaggcgatcgccgagaacggcaaggtcatcgtgaccggctgcatgggc
gtggaagaatccgtcatccggcaggtgcatcccagcgtgctggccgtgaccggaccgcag
cagtacgaggaagtggtgcgcgcggtgcacggcgtggcgccgccccgccaggaccacaac
ccatacctggacctggtcccgccgcaaggcgtcaagctgacgccgcgccattatgcctac
ctgaagatttccgaaggctgcaaccatcgctgcagcttctgcatcattccctccatgcgc
ggcgacctggtgagccggccggtgggcgacgtgctcagcgaggccgagcggctggtgcgg
gccggcgtcaaggaactgctggtcatctcgcaggacaccagcgcctatggcgtggacatc
aagtaccgcagcggtttctggaatgggcggccggtcaagacgcgcatgaccgagctgtgc
gccgcgctgtccgagctgggcgtgtggacccgcctgcattacgtctatccgtatccgcac
gtggacgaagtgatcggcctgatggccgacggcaaggtgctgccctatctggacatcccg
ttccagcatgccagcccgcgcatcctgcgcgccatgaagcgcccggcgttcgaggacaag
acgctggcgcgcatcaagcgctggcgcgaagagtgccccgacctgacgctgcgctcgacc
ttcatcgtgggctttccgggcgagaccgaggaagacttccagtacctgctggactggatg
agcgaagcccagctcgaccgcgtcggctgtttccagtactcgccggtcgaaggcgcgccg
gccaacacgctcgacaatcccgtgccggacgaggtcaagcaggagcgctgggagcgcttc
atggaacaccagcaagccatctccaccgcgcgcctgagcacgcgggtaggccgggagatc
gacgtgctgatcgacagcgtggacgaagaaggcgcggtcggccgctccagcgccgacgcg
ccggagatcgacggctgcgtctacgtcgacagcgagcagccgctgaaggccggcgacatg
gtgcgggtgcgcgtcaccgactccgacgagtacgacctctggggcgagcggatcgcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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