KEGG   Brachyspira pilosicoli P43/6/78: BPP43_04820
Entry
BPP43_04820       CDS       T02387                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
bpip  Brachyspira pilosicoli P43/6/78
Pathway
bpip03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BPP43_04820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpip03400]
    BPP43_04820
DNA repair and recombination proteins [BR:bpip03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BPP43_04820
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BPP43_04820
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD MAAL_C
Other DBs
NCBI-ProteinID: AGA66234
UniProt: A0A3B6VM74
Position
1004830..1006869
AA seq 679 aa
MKSFKIESNFKPSGDQITAIDSLVKGLENKNKYQTLLGVTASGKTFTIANVIEKANRPTL
VMSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDR
LRLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQY
ERVKDVLERARFKVMGDTLEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKIAEQDRVV
IYPAKHFVTGGDKLAAGIKLIEEELEEQYNKFKSEGKLVEAERIYGRTKYDLEMLREVGY
CAGIENYSRPLSGRKEGDRPACLIDYFPKDFLTIIDESHVSVPQIRGMFFGDRSRKETLV
KYGFRLPSALDNRPLFFEEFESLTNDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPII
EVYPINGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTV
ERVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAA
RNANGRVIMFADTISDAMKVAIEETERRRKIQMDYNKEHNITPKTIIKKIQDIIEREEKV
ETSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQ
LKPAKKSVHKNITSKKAKH
NT seq 2040 nt   +upstreamnt  +downstreamnt
atgaaaagttttaaaatagaatcgaatttcaagccttcaggagaccaaataacagcaata
gactctttagttaaagggcttgaaaataaaaataaatatcaaacactgctcggagttact
gcaagcggaaagacattcactatagcaaatgttatagaaaaagcaaaccgccctactctt
gtaatgtcgcataacaaaactttggcagcacagctttacagagaattaaaagacttcttt
ccaaacaatgcagttgaatatttcgtttcttattatgactactatcagcctgaagcatat
gttcctgctaaggatttatatattgataaagacgcctcagttaatgatgagattgacagg
ctaagacttaaagctactacttcgcttcttgaaaggcgagatgttataattgttgcttct
gtttcatgtatatatggtttgggttctcctgaagattatagaaagctctatatcgcaata
gaaaaagacggagaatatgacagagatgagataatcgaaaaattagtgtctatacaatat
gaacgtgttaaagatgtgcttgagagggcaagatttaaagtaatgggagatactttagag
ataatgagtgcctattctgatgaggttataagagtagagttttttggagataccgttgaa
cgcatcataaaaattaaccctatcacaagacaaaaaattgccgagcaagatagagttgta
atatatcctgcaaaacacttcgttacaggcggagacaaattagcagcaggaataaaatta
atagaagaagaacttgaagaacaatataataaatttaaatccgaaggaaaattggtagaa
gctgaaagaatatatggaagaacaaaatatgacttagaaatgcttagagaagtgggatac
tgtgcaggcatagaaaactactctcgcccattgtcaggacgtaaagagggagatagacct
gcttgtttgatagactattttccaaaagattttttaacgataatagatgagtcgcatgtg
agtgttcctcaaattagaggaatgttttttggagatagaagcagaaaagagactttagta
aaatatggttttaggcttccttcagcattagacaatcgtccattattttttgaagagttt
gaaagcctcactaatgatacaatatatattagtgctactcctgcagaatatgaacttaaa
aaaagcagccaagttgtagagcagataattcgccctacaggactccttgaccctataatt
gaagtatatcctataaacggtcaaatagacagaattcttgaagagataaaaaaaacagta
tccaacaacgaaagaatatttataacaacactcacaaaaaaaatggcagaagacctcaca
aaatatttaaatgaaaatggtgttagaactcgttatttgcattcagacattcaaacagtt
gagcgtgttgagataataagagatttgaggcttggggcttttgatgtgcttgtgggtatt
aaccttttaagagaggggcttgatgtacctgaagtatcactcatactaatacttgatgcc
gacaaaacaggttttttaagaaataccactactctaatacagactatagggcgtgctgca
agaaatgctaacggcagagtgataatgtttgcagacactataagcgatgctatgaaagta
gccattgaagagacagaaagaagaagaaaaatacaaatggactacaacaaagagcataac
atcactccaaaaacaataatcaaaaaaatacaagatataattgaaagagaagaaaaagtt
gaaacttcttatgagcttcattttgactttagacgcttcaatgaaagagtaaaaattgac
ccagaacaaaaaagtgatgattatataaaagagcttgaaaaagagatgaaaaaagcttca
gacagtttagagtttgaaaaggctattgaaataagagagaaaataaatcagcttaaacaa
ttaaagccggcaaaaaaatctgtgcataaaaatatcacttcaaaaaaggctaaacattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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