KEGG T03962: ABD05

Burkholderia pyrrocinia: ABD05_13305

Entry

ABD05_13305       CDS       T03962

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

bpyr Burkholderia pyrrocinia

Brite

KEGG Orthology (KO) [BR:bpyr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpyr03016]
    ABD05_13305 (truB)
Enzymes [BR:bpyr01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ABD05_13305 (truB)
Transfer RNA biogenesis [BR:bpyr03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ABD05_13305 (truB)
Prokaryotic type
    ABD05_13305 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2 TruB_C

Other DBs

NCBI-ProteinID:

AKM01095

UniProt:

A0A0G3WUB7

Position

1:2909750..2910682

AA seq 310 aa
MTNAASQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGLRTTTGDAEGEVIDTRPVECDRAAVEAALVRF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALDVLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDADESARDAWLQPVD
ALLSTFPSVRLDDASAKRFLHGQRLPLSELGPIDATDGERVRVYDATRLLGVARKANGVL
APERLVVTAA

NT seq 933 nt +upstreamnt +downstreamnt
atgacgaatgcagcatcccaacgtccgcgcgtgccccggcgcgcgctggatggcgtcctc
ctgctcgacaagccggtcggcctgtcgagcaacgacgcgctgattcgcgcgaagcggctg
cttctcgcgaagaaagccggtcacaccggcacgctcgatccgctggcttcggggctgctg
ccgctgtgtttcggcgaggcgacgaagttttcgcaggatctgctcgaggccgacaagacc
tacgaagcgacgatgcgtctcggcctgcgcacgaccaccggcgacgcggaaggcgaagtg
atcgacacgcggccggtcgaatgcgaccgcgcagcggtggaagccgcgctcgtgcgcttc
accggcgagatcgtgcaggtcccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatatgcgcgcgcgggccagaccgtcgagcgcgaaggccgcaacgtgacgatc
catgcgctcgacgtgctcgcctgcgaactgcccgacgtgacgtttcgcgtgacctgcagc
aagggcacttatgtgcgcacgctggcggaggatatcggcgaggcgctcggttgcggtgcg
catctgacgatgctgcgccgcacgggcgtcggcgcgctgacgctcgagcatgcggtgacg
ctcgatgcgctgtcggacgcagacgaatcggcgcgcgatgcgtggcttcagccggtcgat
gcattgctgtcgacgtttccgtcggttcgtcttgacgacgcgagcgcgaagcggttcctg
cacggccagcgcctgccgctgtcggagctcgggccgatcgatgcgaccgacggcgagcgc
gtgcgcgtctacgacgcgacgcggctgctcggcgtggcgcgcaaggcgaatggtgtgctt
gcgccggaacggctcgtcgtgacggccgcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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