KEGG   Bradyrhizobium sp. ORS 285: BRAD285_6536
Entry
BRAD285_6536      CDS       T04956                                 
Name
(GenBank) conserved protein of unknown function
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
bro  Bradyrhizobium sp. ORS 285
Pathway
bro03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    BRAD285_6536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bro03400]
    BRAD285_6536
Enzymes [BR:bro01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BRAD285_6536
DNA repair and recombination proteins [BR:bro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     BRAD285_6536
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: SMX61231
UniProt: A0A1Y6KND2
Position
6579816..6580736
AA seq 306 aa
MALQRRRRTVVGMKSSYPGFIEPALASAVDRVPSGARWIHEIKFDGYRVQVHLESNDVKV
FTRRGYDWTPRFRKIAHEAAEIKTHSAIIDGEVVVPQANGATDFSVLQNELKGRSQKIVL
VAFDLLYLDGHDLRRLPLTERKTRLKKLIAGSRLQFSESFAIHGREMFSHACKVGLEGVV
SKVADSRYVSGRNNDWVKKTCAQRETLPIAGFSLDGDEWDGIYVGRYKNGDLVYAGKVDH
GFDRNSADELRTRLTPLIRKTQPYSKRIAHHGVWVEPELLAEIEYRTKSAEGKVRHPFFK
GLREDL
NT seq 921 nt   +upstreamnt  +downstreamnt
gtggcgttgcagcgtcgccgccgaacagtggtcggcatgaaatcatcctatcctggattt
atcgagcccgcgctcgccagtgccgtcgaccgcgtgccgagcggagcgcgatggatccac
gagatcaaatttgacgggtatcgcgtccaggttcatttggagagcaacgacgtcaaggtc
tttacgcgccgcggctatgactggacgccacgcttccgcaagatcgcccacgaggccgcc
gagatcaaaacgcattcggccatcatcgatggcgaggtcgtcgtcccccaagcaaacggc
gccacggatttctccgttctgcagaatgaactcaaaggccgctcccagaagatcgtcctg
gtcgccttcgacctgctctatctcgatggccacgatctgcgccgtttgccgctgacggag
cgcaagaccagactcaagaagctcatcgccggcagcaggctccagttcagcgaaagcttc
gctatccacggccgcgagatgttcagccacgcgtgcaaggttggtctggagggtgtcgtg
tccaaggtggcggacagtcgctacgtttcgggccgcaacaatgattgggtcaagaagacc
tgcgcacaacgggagaccctacccattgcgggcttctcgctcgacggggacgaatgggac
ggcatctatgtcggccgttacaagaatggtgacctggtctatgccggcaaggtcgatcac
ggcttcgatcgcaactcggccgatgagctccgcacccgcctcacgccgctgatccgcaag
acacagccctattccaagcggatcgcccaccacggggtgtgggtcgagccggagctgctg
gcggaaatcgagtaccgcaccaagtcggccgagggaaaggtccgtcatcccttcttcaag
gggctccgggaggatctttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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