KEGG   Brassica rapa (field mustard): 103829042
Entry
103829042         CDS       T03449                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5
  KO
K10730  ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brp03032]
    103829042
   03400 DNA repair and recombination proteins [BR:brp03400]
    103829042
Enzymes [BR:brp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     103829042
DNA replication proteins [BR:brp03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    103829042
DNA repair and recombination proteins [BR:brp03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     103829042
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF5382_C
Other DBs
NCBI-GeneID: 103829042
NCBI-ProteinID: XP_009102943
Position
A07:complement(11613311..11617970)
AA seq 899 aa
MESDSDSDGSHISATPPRDPFPSPPPKQVPPVSRKAPSSSSSSRSKPKAHTHPQAPDHSE
EAPVPSSYPPPPSLFTDLPFRICEPSNRSQPAGSSSSVSSFYRLPRANTSESESQSSSVN
HVLPELPHVPVVRRKPPNLITDSITSQPVKAPVVFRSGGEGNFVKLNLNGKRGKKFPSKY
KSASKSRSKFAYRGKRYKKSEANGEEEEGETWLDEESDLQRDNGFISSVEEAVLAVKAEA
SDENLTKLLSLVYGYESFRDGQLQAIKMVLSGSSTMLVLPTGAGKSLCYQIPAMILPGIT
LVVSPLVSLMIDQLKHLPSVIKGGLLSSSQRPEEATETLRKLKEGIIKVLFVSPERLLNV
EFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLYSALTADCILAMTATATT
MTLQAVMSALEIPSTNLIQKSQLRENFELSVSLSGANRLKDLLILMESQPYKKIRSIIVY
CKFQYETDMISKYLRDNNITAKGYHSGLPAKDRVRIQESFCSNKIRVVVATVAFGMGLDK
GDVGAVIHFSVPGSLEEYVQEIGRAGRDGRLSYCHLFYDEDTYLKLRSLSHSDGVDEYAV
GKFLTHVFSSDTKQHEKICSIVIESASHKFDMKEEVMQTILTHLELGEVQYLRMLPQVNV
CCTLNFHKSSPNILAARNIIVAAILKKSHVKQGLYVFDIPTVASSTGVAATDVLAEIQTL
KMKGEVTYETKDPAFCYTILESPKDTSSLSSHLTKWLAEVESCKVRKLDIMSSAAMAAIN
VSNTSETSSGAKQTLSLQSRILDYFNGDENCDVPSKTTQNCSFLRADIKVFLQSNRQAKF
TPRAIARIMHGVGSPAFPNSIWSKTHFWGRYMSVDFRAIMEAAQTELMNFVDRNAALAS
NT seq 2700 nt   +upstreamnt  +downstreamnt
atggaatccgattcagactccgacggttctcatatctccgccactcctccccgtgaccct
tttccttcaccgccgccaaagcaggttcctccagtttcccgtaaagcaccgtcttcttct
tcttcttctcgctcgaagcccaaagcacatacgcatccgcaggctcctgatcactcggag
gaagctccagtaccatcttcctatcctcctccaccttctttattcaccgatctccccttc
cggatctgcgaaccctcgaatcgatcccaacccgctgggtcttcctcttccgtttcgtcc
ttctatagactcccgagagcgaatacatcggaatcggaatcccaatcgagtagcgtcaat
catgtcctcccagagctccctcacgtgccagtcgttagaagaaagcctcctaacctcatc
acggattctataacttctcagccggttaaagctccggtggtgtttcgtagcggcggcgag
ggtaatttcgtgaaattgaacttgaacggcaagagagggaagaagtttcccagcaaatac
aaaagcgcatccaaatccagaagcaaattcgcatacagagggaagagatacaagaagtca
gaagctaacggcgaagaagaagaaggtgaaacttggttggatgaagagtctgatttgcag
agagataatggttttatcagctcggtagaggaagctgttcttgcagtgaaggctgaggct
tctgatgagaatctgacgaagctgttgagtttagtgtatggttatgagtcttttagggat
gggcagttgcaggctatcaagatggttctttctgggagttcaaccatgcttgtgttgcct
actggtgctggcaagtctctctgctaccagattccggctatgattcttcctgggatcacg
ctcgttgtgagccctttggtttcgctgatgattgatcagttgaagcatttgccttcggtt
attaagggtggtctcttaagcagtagccagagacctgaggaagcaacagaaacattgagg
aaactcaaagaaggcataataaaggttctctttgtgtctcccgagaggcttctgaacgta
gagtttttgtcaatgtttcgcatgtctttatctgtgtcgcttgtcgttgtggatgaggca
cactgcgtatcagaatggtctcataacttccgcccttcatacatgagactcaaggcgtca
atgctgtattctgcactcacggcagattgcattcttgcaatgactgcaaccgccactact
atgactcttcaggctgtcatgtcggcactagagataccgtcaaccaatcttattcaaaag
tcacaactcagagaaaatttcgagctgtctgtctcattgagcggagctaacagactgaaa
gatctattgattttgatggagtctcaaccatataagaagattcggagcattatcgtgtac
tgcaaatttcagtatgagactgacatgataagcaagtatttacgtgataacaacatcact
gcaaagggttatcatagtggtcttccagcgaaagaccgtgttcgcatacaagagtcattt
tgttccaataagattagagtggttgttgcaactgtggcattcggcatgggacttgacaaa
ggagatgttggagctgtaatccatttcagcgtgccaggcagtttggaagaatacgttcag
gaaattggacgtgctggtcgtgacgggcggttatcttattgtcatctcttttatgatgag
gacacatatctaaagcttcggagtctttcacacagtgatggtgttgatgaatatgcagtt
ggaaaatttctcacccatgtgttctcatctgacacaaagcaacatgagaagatatgctcc
atagtcattgaatctgcctctcataaatttgacatgaaggaagaggttatgcaaacgatt
ttgacacatttagagttgggggaagtgcaatacttacgtatgcttccacaggttaacgta
tgttgcacgttgaacttccacaagtcttctccaaatattctggctgcacgaaacatcata
gttgcagcaattctgaagaagtctcacgtgaagcaagggttatatgtcttcgatatccca
acagtggcctctagcacaggtgttgcagcaacagatgtcttggctgagattcaaactctg
aagatgaagggggaagtaacatacgagacgaaggaccccgccttttgttacacaatctta
gaatctccaaaggatacatcttcgttgtccagccatcttaccaagtggctcgcagaggtt
gaatcttgcaaagtaaggaaactagatattatgtcaagtgcagccatggctgctataaat
gtctccaacacttcagaaactagttcgggtgccaagcaaactctgagcctgcaaagcaga
atcttggattacttcaatggagacgaaaactgtgacgttccgagcaagacgactcaaaat
tgttcctttctacgagcagacataaaggtgttcttgcagagtaatcgccaggccaagttc
acgccaagagccatagcgaggataatgcatggagttggaagtccagcttttcctaattca
atctggtccaagacacatttctggggaaggtatatgagcgtagacttccgagcgataatg
gaagctgcacaaacagagctaatgaattttgttgatagaaatgcggctttagcttcatag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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