KEGG   Brassica rapa (field mustard): 103868951
Entry
103868951         CDS       T03449                                 
Name
(RefSeq) elongation factor-like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103868951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:brp03009]
    103868951
Ribosome biogenesis [BR:brp03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    103868951
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 SRPRB EFG_IV Spectrin MMR_HSR1
Other DBs
NCBI-GeneID: 103868951
NCBI-ProteinID: XP_009145247
UniProt: A0A3P5YXW1
Position
A05:18006676..18010466
AA seq 1012 aa
MDECDGRKIRNICILAHVDHGKTTLADHLIASSGDGELLKPRLAGKVRYMDYLDEEQRRA
ITMKSSSISLRYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
RQAWIEKLTPCLVLNKIDRLICELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKYLSDVDS
ILASPSGEITDESLELLEDDEEVTFQPQKGNVVFVCALDGWGFGVSEFANFYASKLGAKA
ETLQKSLWGPRYYFPKTKMIVGKKSLSAGSKIKPMFVQFVLEPLWEVYEAALDPGSDRAV
LAKVIKSFNLNIPQRELQNKDPKNLLQSVMSRWLPLSDAVLSMAVKHLPDPISAQAYRIP
RLVPERKVIGGNDADSSVLAEAEHVRRSIEACDSSRDSPCVVFVSKMFAMPMKMIPLGGD
HRERMNGLNDDDSKSESDECFLAFARIFSGVLRAGQRVFVISALYDPLKGESSQKYIQEA
ELHSIYLMMGQGLKPVNEVKAGNVVAIRGLGPYISKSATLSSTRNCWPLASMEFQVSPTL
RVAIEPSDPSDMSALMKGLRLLNRADPFVEITVSARGEHVLAAAGEVHLERCIKDLIDRF
ARVNIEVSSPLVSYRETIEGDGSNLLESLRSLSLNASDYVEKRTPNGRCVIRVHVMKLPH
SLTKLLDESTDLLGDIIGGKGSHSIKILESQSPSLEENVDPIEALKSQLVEAGVSSSSET
ENDREKCKAEWAKLLKRIWALGPREKGPNILFAPDGRRICEDGSILVRGSPHVSQRLGFT
EDSTETPPDSALYSEALTLESSIVSGFQLATASGPLCDEPMWGLAFTIESHLAQDSETEK
QPENFGIFTGQVMTAVKDACRAAVLQTNPRIVEAMYFCELNTAPEYLGPMYAVLSRRRAR
VLKEEMQEGSSLFTVHAYVPVSESFGFADELRKGTSGGASALMVLSHWEMLEEDPFFVPK
TEEEIEEFGDGASVLPNTARKLINAVRRRKGLHVEEKVVQHATKQRTLARKV
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggatgagtgtgatggtaggaagattaggaacatttgcatcttagcacacgtagaccac
ggtaaaacaactctcgctgaccacctcattgcttcctccggtgacggtgagctgcttaaa
ccgaggctagctggtaaggttaggtacatggactatctcgatgaagagcagcgccgtgct
atcaccatgaaaagctcctcgatttctcttcgctacaaggactattctctcaatctgatt
gactcccctggacacatggacttctgtagtgaagtctctacagctgctcggcttagtgat
ggtgctttggttctggttgatgctgttgaaggtgtacacattcagacccatgctgtgttg
cggcaagcttggattgagaagctcactccttgcttggtgcttaacaagattgataggctg
atttgtgagttgaggttgagtcccatggaagcctatactcgtttgattaggattgttcat
gaggttaatgggattgtgagtgcgtataagtctgagaagtatttgtctgatgttgactct
atacttgcgagtccttcaggtgagattactgatgagagtcttgagttgttggaggatgat
gaagaggttacgtttcagcctcagaagggtaatgtcgtctttgtgtgtgctttggatgga
tggggttttggggtctctgagtttgctaatttctatgcttccaagcttggagctaaagcg
gagacgttgcagaaatcattatggggtcctcgttattattttcctaagacaaagatgatt
gtagggaagaagtctttaagtgcgggaagcaagataaaaccaatgtttgtgcagttcgtg
cttgagcctttgtgggaggtttacgaggctgcactagatcccggcagtgatagagctgtt
ctcgcgaaagttatcaaatcttttaacttgaatattccacaacgcgagcttcagaacaag
gatcctaaaaacttgcttcaatcagtgatgagccgttggcttcctttgtctgatgcagtc
ttgtctatggctgtgaaacatctgccagaccccatttcagcacaggcatatagaatccca
cgcttggtcccagaaagaaaagttataggtggtaacgatgctgattcaagtgtccttgca
gaagcagagcatgttagaagatcaattgaggcttgtgactctagccgtgactccccctgt
gttgtgtttgtatctaaaatgttcgctatgcccatgaaaatgatacctctgggaggagac
cacagggagaggatgaacggtttaaatgatgacgacagtaaaagcgagtcggatgagtgt
ttccttgcatttgccaggatctttagcggtgttcttcgcgccggacaaagggtctttgtg
atttccgctctatatgatcctctcaaaggcgaatcgtctcagaagtacattcaagaagca
gaactccactcaatctatcttatgatgggacaaggtttaaaaccagtaaacgaggtgaaa
gctgggaatgtagtggccataagagggcttggaccatatatatcaaaaagcgccacactt
tcatctactagaaactgctggcccttagccagcatggagtttcaggtctctcccactctt
agagtggcgattgagccatcggatccttcagatatgagtgctctgatgaaaggtctaaga
cttttgaaccgagcagatccttttgtggagatcacggtgtctgctcgaggagaacatgtg
cttgctgctgctggagaagttcatctagaaagatgtatcaaggatttgatagacagattt
gcaagagtgaacattgaagtctcttcgcctctcgtttcctacagggagacaattgaaggt
gatggctctaatcttttggaaagtttgagatctctgagcttgaatgcgtcggattacgtt
gagaagagaactccaaacggcagatgcgttatcagagtacacgtcatgaaactaccacac
tccctaaccaagctgcttgatgagagcactgacttgcttggtgacattattggaggcaaa
ggcagtcatagtattaagatactagaatctcaaagccctagcctcgaagagaatgtggat
cccattgaagcattaaagagccagttagttgaagctggcgtttcttcaagctctgaaacc
gagaatgatcgtgagaagtgcaaagctgagtgggcgaagttgctcaagaggatatgggcg
cttggtccaagagagaaaggtccaaacatactatttgctccagatggtagaagaatctgc
gaggatggatccattctcgtgagaggctctcctcatgtctctcagagacttggcttcaca
gaagattctactgagacaccacctgactcagcattgtacagtgaagctcttactctcgaa
agcagcatagtctcggggtttcagctagctacagcatcaggacctctatgtgatgaacca
atgtggggattagctttcaccattgagtctcatctcgcacaagattcagaaacagagaaa
caacctgaaaactttggaatattcacaggacaagtcatgacagctgtcaaagacgcatgt
agagccgccgtgcttcagacaaatccacggatcgtggaagctatgtacttctgcgagcta
aacacagcaccggagtatcttggtcccatgtacgccgttctgagcagaagacgagctaga
gttctcaaggaagaaatgcaagaagggtcgtctctgtttacagtccatgcctacgtgccc
gtttctgaaagtttcggttttgcagacgagctgagaaaaggaacgtcaggtggtgcgagt
gcgctgatggttctgagccattgggaaatgcttgaggaagatcccttctttgttcccaaa
actgaagaagagattgaagagtttggtgatggagcaagcgtccttcccaacacggcgagg
aagctcatcaacgccgtgagacgcaggaaagggttacacgttgaggagaaagtggttcaa
cacgccactaaacagagaaccttggctcggaaagtttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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