KEGG   Bradymonas sediminis: DN745_08715
Entry
DN745_08715       CDS       T05497                                 
Name
(GenBank) hypothetical protein
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
bsed  Bradymonas sediminis
Pathway
bsed03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bsed00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DN745_08715
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bsed03019]
    DN745_08715
   03009 Ribosome biogenesis [BR:bsed03009]
    DN745_08715
Enzymes [BR:bsed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DN745_08715
Messenger RNA biogenesis [BR:bsed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DN745_08715
Ribosome biogenesis [BR:bsed03009]
 Prokaryotic type
  rRNA helicases
   DN745_08715
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII Peripla_BP_4
Other DBs
NCBI-ProteinID: AWV89414
UniProt: A0A2Z4FL43
Position
2295907..2298195
AA seq 762 aa
MVETVEKSFEDFFLSEEMLKALRTVGYKRPTPVQAESIPLILAGIDLIVQSHTGSGKTAA
FAVPATDMLEANPGRIEVLVLAPTRELAKQSAAEFERLGQYKELSATAIYGGASYETQLE
ALKTAQIVTATPGRLLDLAKRGDIDLSTLRIFCLDEADEMLSMGFREELNAIVDFLPKER
QSLLFSATVNSEIQALAKGMLYYPEYISLSGDQVAAAAVTHLYYRVAGMGRKRDLVRVIQ
FERPDSAIIFCNTRNDTFEVTEYLQQAGYRAKVLNGDLPQNQREATLAELRNGTVDFIVA
TDVAARGIDITDLTHVINYTLPSSAETYVHRTGRTGRAGKKGRAITLLAPAEMATHFDIM
SLYDIEIEQRQLPTDKEVQQAQAVDRLDSLVSDVMAMKDVSGEATLALATTLLSAHAENP
GAEPELDSVLAKLLALADMVLRDPKIADIVTGRAPLVAPAKAEPKKDAAEKAAPAKTPEA
VEPKEEAAPAKAPTPEASESGRSKRRSNRKSRSKSSSSSRRSSKAHAETKSETKTEAKTE
TESNEPRRRRRRRSRGAKTTTPSSSSVSTVTPEVDTPEEPSASKRRSTGARRRQPVEDAE
ESRGNRSRRRKRSSGGSKSSKSSKRSRGSKSSKSSRGSKSSKRSRGSRSSKSTRDNKRSR
GNKRSRRNERSSGSAASTASTPTFDTSKMYLNVGRDHVEDSKELLEMICYMSGFDTEDFA
DISVQSSYSFVQVLQSYFYDIINAINNQEWKGVSISAEPARK
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggtagagaccgtcgagaagtcctttgaagattttttcttgagcgaagagatgctcaag
gccctgcgcaccgtgggctataagcgccccaccccagtccaggcggagtcgattccgctg
atcctggccggcattgatctgatcgtgcaatcgcatacgggttcgggaaaaaccgccgcc
tttgcggtgcccgccaccgatatgctcgaggcgaacccgggccgcatcgaagtcctggtg
ctcgcgcccacgcgcgaattggccaaacagagcgcggcagagttcgagcgccttggtcag
tataaggaattgtcggccaccgcgatttacggcggcgcatcctacgagacccagcttgag
gcgcttaagaccgcccagatcgtcaccgcgacccccgggcgactcctggacctggccaag
cgcggcgatatcgacctgagcaccctgcgcatcttctgcctcgacgaggccgacgaaatg
ctgtcgatgggcttccgcgaggagctcaacgcgatcgtcgacttcctgccgaaggaacgc
cagtcgctgctgttctccgcgacggtcaactccgaaattcaggccctcgccaagggcatg
ctctattatcccgaatatatctcgctgtcgggcgaccaggtcgccgcagccgcggtcacg
cacctctactaccgcgtcgccggcatgggtcgaaaacgcgatctggtgcgcgtgattcaa
ttcgagcgccccgatagcgcgatcattttctgcaacacgcgaaatgacaccttcgaggtc
accgaatacctgcagcaagccggataccgcgcgaaagtgctcaacggcgatctgccgcag
aaccaacgcgaagccacactggcggagctgcgaaacggcaccgtcgacttcatcgtggcc
accgacgtcgccgcgcgcggcatcgacatcaccgacctcacgcacgtgattaactacacg
ctgccgagctcggccgagacctatgttcaccgcaccggtcgcaccggacgcgccggcaaa
aagggacgcgccatcaccctgctcgccccggccgagatggccacgcatttcgacatcatg
tcgctctacgatatcgagatcgagcagcgccaattgccgaccgacaaagaggtccagcag
gcccaggccgtggaccgactcgactcgctggtcagcgacgtcatggcgatgaaagacgtc
tctggtgaagcaaccctcgcgctcgcgaccacactgctgagcgcgcacgccgagaatccg
ggggcggagcccgagcttgactccgtgctcgccaagcttcttgcgctggctgatatggtc
cttcgcgacccgaagatcgccgatatcgtcaccggacgcgcgccgctggttgcgccggca
aaagccgagcccaagaaagacgccgccgaaaaagccgcgcctgcgaagacgcccgaagcc
gtcgagcccaaagaagaagcggcaccggcgaaagccccgacgccagaggcctccgagagc
gggcggtcgaagcgccggtccaaccgcaagagccggtcgaagtcttcgtcctcaagccgt
cgctcgagcaaggcccacgccgaaacgaagtcggaaaccaaaaccgaagcgaagaccgaa
acagagtcgaacgaaccgcgccgtcgccgccgacggcgctccagaggcgcgaagaccacg
accccgtcttcgtcatcagtcagcacggtcaccccggaagtcgacacccccgaggagccg
tcggcgagcaaacgacgctccaccggcgcgcgccgccgccagccggtcgaagacgccgag
gaatcccgcggaaatcgaagccgtcgccgcaagcgaagcagcggcggaagcaagagcagc
aaaagcagcaagcgcagccgcggaagcaagagcagcaagagcagccgcggaagcaagagc
agcaagcgcagccgtgggagccgaagcagcaagagcacccgggacaacaagcgcagccgc
ggcaataagcgtagccgccgcaatgagcgcagctcgggcagcgcggcgtcgaccgcgtcg
acgccgacgtttgacacctcgaagatgtacctcaatgtcggccgcgatcacgtcgaagac
tccaaagagttgctcgaaatgatctgctatatgtccggcttcgacaccgaggacttcgcc
gatatctcggtgcagagcagttatagttttgtacaggtgcttcagtcgtatttttatgac
atcatcaacgcgatcaataaccaggaatggaaaggcgtgagcatcagcgccgagcccgcg
cgcaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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