KEGG   Bos taurus (cow): 789493
Entry
789493            CDS       T01008                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
bta  Bos taurus (cow)
Pathway
bta04151  PI3K-Akt signaling pathway
bta04510  Focal adhesion
bta04512  ECM-receptor interaction
bta04820  Cytoskeleton in muscle cells
bta04974  Protein digestion and absorption
bta05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    789493 (COL9A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    789493 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    789493 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    789493 (COL9A3)
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    789493 (COL9A3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    789493 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:bta00535]
    789493 (COL9A3)
Proteoglycans [BR:bta00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   789493 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 789493
NCBI-ProteinID: XP_024856893
BGD-bta: BT10452
VGNC: 27577
Position
13:complement(54545391..54566364)
AA seq 740 aa
MQKPPPTQVGWLNGGLVRGPAGRELASGRPTTSPARRAQLEAPASAASSAQSATAAMAGA
PTLALLLLGQLLAATVILTEAQKVGPRGPPGPQGPPGKPGKDGIDGEVGPPGLPGPVGPK
GAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPPGIPGTVGLQGPRGLRGLSGPLGPPG
DRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGIPGMSGPSGEPGMPG
KDGQDGVPGLDGEKGEAGRHGAPGEKGPNGLPGLPGRAGSKGEKGELGRPGELGEAGPSG
EPGVPGDVGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGSIGDPGLPGPQGLRG
GVGDRGPGGAAGPKGDQGIAGADGLPGDKGELGPSGPVGPKGESGSRGELGPKGIQGPNG
TSGVDGVPGPPGPVGLQGVRGVPGITGKPGVPGKEASEQHIRELCGGLVSEQIAQLAAHL
RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGDRGDK
GSAGEGLDGPDGDQGLQGPQGVPGISKDGRDGAHGEPGLPGDPGLPGAVGAQGPPGICDT
SACQGAVMAAVGEKSGPRSS
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgcagaagcccccgcccacccaggtgggctggctgaatggggggcttgtgcgagggccg
gcggggcgggaactggcatctggccggcccacaaccagccccgcccgccgagcccagctc
gaggcccctgcctccgccgccagctccgctcagagtgcaactgcagccatggccggagcc
cccaccctggccctgctgctgttggggcagctgctggctgccaccgtaatcttgactgag
gcacagaaagtgggacctcgaggcccccccggtccccaagggccacctgggaagccagga
aaggatggcattgatggagaagttggtcctcctggtctgcctgggcccgtgggaccgaaa
ggggccccagggaagccagggaaaccaggagaggccgggctgcctggactgcctggagtg
gatggtctgaccgggcaggatggacctcctggacccaagggcgctcccggagaacgggga
agtctgggacctccagggccacctgggctggggggcaaaggcctccctggacctcctgga
gaggcaggggtgagcggcctcccaggtggaattggcctccggggccccccgggaccctca
ggactcccaggcctccctggccccccaggacctcctggcccccctggtcacccaggggtg
cttcccgaaggtgctactgatcttcagtgcccggccatctgcccgccaggcccccccggg
cccccaggaatgccagggttcaagggacccaccggctacaaaggggagcccggagaagtt
ggcaaggatggcgaaaagggtgaccccggcccccctggaccccctggtatcccgggcacc
gtggggttgcagggtccacggggcctacgaggactttcagggccacttggaccccccggg
gaccggggtcccattgggttccgagggccccctgggatcccaggagcccctgggaaagcg
ggcgacagaggagagaggggcccagaggggttccgtggccccaagggcgaccttggcagg
cctggtcctaaaggcatccccggcatgtctgggcccagtggagagccgggcatgccaggc
aaggacggccaggacggcgtgccaggactcgatggcgagaagggagaagctggtcgccac
ggtgccccgggagagaaggggcccaacgggctaccgggtctccccggacgagcagggtcc
aagggtgagaaaggagaactgggcagacctggagagctgggtgaggccggcccctcggga
gagcctggtgtccctggagatgttggcatgcccggcgagcgtggagaggctggacacagg
ggctcagcgggggcgctgggcccgcaaggcccccccggggcccctggcgtccgtggcttc
cagggccggaagggcagcataggagaccccggcctgccgggcccccaaggcctccgaggt
ggtgtgggcgaccggggcccgggaggagctgccggccccaagggcgaccagggcatcgca
ggtgctgacggccttcctggggataaaggagaactgggtcccagcggccctgttggcccc
aaaggagagtctggcagtcgcggggagctgggccctaagggcatccagggccccaatggc
accagcggcgtagatggcgtccctggcccccctggccccgtgggcctccagggcgtgcga
ggcgtgcctggcatcactggaaaacctggggtcccggggaaagaagccagcgagcaacac
atcagggagctgtgcggggggctggtcagtgagcaaatcgcgcaactggccgcgcacctg
aggaagcccctagcaccaggctccatcgggcgaccgggtcctgctggccccccgggcccc
ccgggccccccaggctccattggtcaccccggggctcgagggccccctggataccgaggt
cccacaggagagcttggagaccctggacccagaggaaaccagggtgacagaggagacaaa
ggctcagctggcgagggcctggatgggcccgacggagaccaagggctgcaaggaccgcaa
ggcgtgcccggcatcagcaaagacggccgagatggggctcatggagagcctgggctcccc
ggcgatcctggccttcctggtgccgttggcgctcaggggcctcctggcatctgcgacacc
tctgcctgccaaggagctgtgatggcagctgtcggggagaagtcaggtccccgaagctcc
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BGD-BTA (1)   
   OC (1)   
   VGNC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (36)   

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