KEGG   Burkholderia sp. CCGE1001: BC1001_2233
Entry
BC1001_2233       CDS       T01424                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
bug  Burkholderia sp. CCGE1001
Pathway
bug03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bug00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    BC1001_2233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bug03400]
    BC1001_2233
DNA repair and recombination proteins [BR:bug03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     BC1001_2233
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_27 Rad17
Other DBs
NCBI-ProteinID: ADX55650
Position
1:2535583..2538258
AA seq 891 aa
MGTQTAAASEVAQHTPMMQQYLRIKAEHPGTLVFYRMGDFYELFFDDAEKAARLLDLTLT
QRGASAGNPIKMAGVPHHAVEQYLAKLVKLGESVAICEQIGDPATSKGPVERKVVRVVTP
GTLTDAALLSDKSDVFLLAMCVAHNRRGIATSVGLAWLNLASGALRLAEVAPDQVAAALE
RIDPAEILVADTAADSASWTPPTGARALTRVPAWHFDVASGTQRLCDQLEVAGLDGFGAH
SLTCACGAAGALLLYAAATQGQQLRHVRSLKVEYESEYIGLDPATRRNLEITQTLRGTES
PTLCSLLDTCCTTMGSRLLRHWLHHPPRESAVARSRQQAIGALLEAPASADLDSLRGALR
HISDIERITGRLALLSARPRDLSSLRDTFIALPELRARLAAVSSNAESLARIDASLEPPQ
ACVELLTRAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLETRERARTGIG
NLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERAL
ARERSLYDALLQALLPFIPDCQRVASALAELDLLAAFAERARALDWVAPSFSLEAGIEIE
QGRHPVVEAQVEQFIANDCTLTAERKLLLITGPNMGGKSTFMRQTALIALLAYVGSYVPA
RRAAFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTF
DGLALAWAIARHLLAHNGCHTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAV
NEGPANQSYGLQVAQLAGVPNAVIRAARKHLAYLEQQSAGQPAPQLDLFAAPPPLLLEDA
DDEPHTANESPAMQALVERLRGIDPNDLRPREALDLLYELHELAAAPDADH
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgggcactcaaaccgcagcggccagcgaggtcgcacaacatactcccatgatgcagcag
tacctgcgcatcaaagcggagcatccgggcacgctggtgttctaccggatgggcgacttc
tacgaactctttttcgacgacgcggaaaaagccgcgcgtctgctcgatctcacgctcacg
cagcgcggcgcgtcggcgggcaacccgatcaagatggcgggcgtgccgcatcacgcggtc
gagcagtatctggccaagctcgtgaagctcggggaatccgtggcgatttgcgaacagatc
ggcgacccggccacgtcgaagggtccggtcgagcgcaaggtggtacgcgtcgtcacgccg
ggcacgctcacggacgccgcgctgctgtccgacaagagcgacgtgtttctgctagccatg
tgcgtcgcgcacaaccgccgcggcatcgcgactagcgtcgggctcgcatggctgaatctc
gcaagcggcgccttgcggctcgccgaagtcgcgcccgatcaggtggccgccgcgctcgaa
cggatcgatcccgcggaaattctggtcgccgacacggccgccgactccgcaagctggacg
ccgcccaccggcgcgcgcgcgctgacccgggtgcctgcatggcatttcgacgtcgcctcg
ggtacgcagcgcctgtgcgatcaactggaagtcgcgggccttgacggcttcggcgcgcac
tcgctcacctgcgcatgcggcgcggcgggcgcattgctgctgtatgcggccgccacgcaa
ggccagcaactgcggcacgtacgcagcctcaaggtcgaatacgaatccgaatatatcggc
ctcgaccccgccacgcggcgcaacctcgaaatcacgcagacgctgcgcggcacggagtcg
cccacgctgtgctcgttgctcgacacctgctgcacgaccatgggcagccgtttgctgcgt
cactggctgcatcatccgccgcgcgaatcggcggtcgcgcggtcgcgccagcaggctatc
ggcgcgttgctggaggcgcccgctagcgccgatctcgactcgctgcgcggcgcgttgcgg
catatctcggacatcgagcggatcaccggccgccttgcgctgctgtcggcgcgaccgcgc
gatctgtcgagcttgcgcgataccttcatcgcgttgccggaactgcgcgcgaggctcgcc
gcggtttcgtcgaatgcggaatcgctcgcccgcatcgacgcgtcgctcgagccgccgcaa
gcttgcgtcgaactgctcacgcgcgccattgcgcccgagccggccgccatggtgcgcgac
ggcggcgtgattgcacgcggctacgacgccgaactcgacgaactgcgggatatttcggag
aactgcgggcagttcctgatcgacctggaaacgcgggaacgcgcgcgcaccggcatcggc
aatctgcgggtcgagtacaacaaggtgcacggcttctatatcgaggtcacgcgcggccag
accgacaaggtgccggacgattatcgccgccgtcaaaccttgaagaacgccgagcgttac
atcacgccggaattgaagacgttcgaagacaaggcgttatccgcgcaggaacgcgcgctc
gcccgcgagcgctcgctctacgacgcgctgctgcaggcgttgttgccgttcattccggac
tgccagcgcgtcgcgtcggcgcttgcggagctcgacctgctggctgctttcgccgaacgc
gctcgcgcgctcgactgggtcgcaccgagcttctcgctggaggcgggcatcgagatcgag
cagggccggcacccggtggtcgaagcgcaggtcgagcaattcatcgctaacgactgcacg
ctcaccgccgagcgcaagctgctgctcatcaccgggccgaacatgggcggtaaatcgacg
ttcatgcgccagaccgcgctgatcgcgctgcttgcctacgtgggaagctacgtgccggca
cggcgcgcggcattcggcccgatcgaccgcattttcacgcgcatcggcgccgccgacgat
ctcgccggcggccgttcgaccttcatggtcgagatgaccgaggccgcggccattctgaac
gatgccacgccgcaaagcctcgtgctgatggatgaaatcggccggggcacctccaccttc
gacggcctcgcgctcgcatgggccatcgcgcggcatctgctcgcgcacaacggctgccac
acgctcttcgcgacgcactacttcgaactcacgcagttgccggcggaatttccgcaggcg
gccaatgtgcatctgtcggcggtcgaacatggacacggcatcgtgttcctgcatgccgtc
aacgaaggaccggcgaatcagagctacggtttgcaggtcgcgcagctcgccggcgtgccc
aacgcggtgatccgcgcggcgcgcaagcaccttgcctatctcgaacagcagtcggcgggg
caaccggcgccgcagctggatctgttcgccgcgccgccgcccctgctgctcgaagatgcg
gacgacgaaccgcacaccgcaaatgagtcgccggccatgcaagcgcttgtcgagcgtctg
cgcggcatcgatccgaacgatctgcgaccgcgcgaagcgctcgatctgctgtatgaactg
cacgagctggccgccgcgccggatgccgatcattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system