KEGG   Burkholderia sp. KJ006: MYA_2001
Entry
MYA_2001          CDS       T02110                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
buk  Burkholderia sp. KJ006
Pathway
buk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:buk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MYA_2001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buk03400]
    MYA_2001
DNA repair and recombination proteins [BR:buk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MYA_2001
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MYA_2001
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII DEAD UVR AAA_30 UB2H AAA_16 Kinesin FlaG AAA_22 DALR_1
Other DBs
NCBI-ProteinID: AFJ86361
UniProt: I2DNY5
Position
1:complement(2176810..2178903)
AA seq 697 aa
MSEHHAAVGDALDESKFVTFEGSPFQLYQPYPPAGDQPTAIETLVEGVHDGLSFQTLLGV
TGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYAEFREFFPRNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSSINEHIEQMRLSATKSLMERRDVVIVATVSAIYGIGNPSEYHQMILT
LRTGDKLGQRDVIARLIAMQYSRNEQDFQRGTFRVRGDTIDIFPAEHAEMAVRVELFDDE
VETLQLFDPLTGRVRQKIPRFTVYPSSHYVTPRDTVMRAIETIKDELRERLEFFHREGKL
VEAQRLEQRTRFDLEMLQELGFCKGIENYSRHFSGAAPGEPPPTLVDYLPPDALMLLDES
HVLIGQLNGMYNGDRARKENLVNYGFRLPSALDNRPLKFPEFERKMRQVLFVSATPADYE
QRVTGQIAEQVVRPTGLVDPEIEVRPASSQVDDVLTEINARVSAGERVLITVLTKRMAEQ
LTEFLADHGVKVRYLHSDIDTVERVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNVNGKAILYADNMTESMKRAIGETERRRAKQIAHNEK
MGITPRGVVKRIKDIIDGVYNADDARAELKEAQQRAKFEDMSEKQLAKEIKRLEKQMADY
AKNLEFEKAAATRDQLALLRERVFGANVGDHVNGAGR
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgtccgaacatcacgccgcagtcggcgacgcactcgacgaatcgaaattcgtgaccttc
gaagggtcgccgttccagctgtaccagccgtatccgcccgcgggcgaccagccgaccgcg
atcgagacgctcgtggaaggcgttcacgacgggctgtcgttccagacgctgctcggcgtg
accggctcgggcaagaccttcacgatggccaacacgatcgcgcggctcggccgcccggcg
atcgtgttcgcgccgaacaagacgctcgcggcgcagctctacgccgaattccgcgaattc
ttcccgcgcaacgccgtcgagtacttcgtgtcgtactacgactattaccagccggaagcg
tacgtgccgcagcgcgacctgttcatcgaaaaggactcgtcgatcaacgagcacatcgag
cagatgcggctgtcggcgaccaagagcctgatggagcgccgcgacgtggtgatcgtcgcg
acggtgtcggcgatctacggtatcggcaacccgtccgaatatcaccagatgatcctgacg
ctgcgcaccggcgacaagctcgggcagcgcgacgtgatcgcgcggctgatcgcgatgcag
tactcgcgcaacgagcaggacttccagcgcggcacgttccgcgtgcgcggcgacacgatc
gacatcttcccggccgaacatgcggagatggccgtgcgcgtcgagctgttcgacgacgag
gtcgagacgctgcaactgttcgatccgctgaccggccgcgtgcggcagaagattccgcgt
ttcaccgtgtatccgtcgtcgcactacgtgacgccgcgcgacaccgtgatgcgcgcgatc
gagacgatcaaggacgaattgcgcgagcgcctcgagttcttccaccgcgaaggcaagctc
gtcgaggcgcagcggctcgagcagcgcacgcgcttcgacctcgagatgctccaggagctg
ggcttctgcaagggcatcgagaactactcgcggcacttttccggcgcggcgcccggcgag
ccgccgccgacgctcgtcgattacctgccgcccgacgcgctgatgctgctcgacgaatcg
cacgtgctgatcggccagctcaacggcatgtacaacggcgaccgggcgcgcaaggaaaac
ctcgtcaactacggcttccggctgccgtcggcgctcgacaaccggccgctcaagttcccc
gagttcgagcgcaagatgcgccaggtgttgttcgtgtccgcgacgccggccgattacgag
cagcgcgtgacgggccagatcgccgaacaggtcgtgcgcccgaccgggctcgtcgatccg
gagatcgaagtgcgcccggcaagctcgcaggtcgacgacgtgctcaccgagatcaacgcg
cgcgtgagcgccggcgaacgcgtgctgatcaccgtgctgaccaagcggatggccgagcag
ctgaccgaattcctcgccgatcacggcgtgaaggtgcgctacctgcacagcgacatcgat
acggtcgagcgcgtcgagatcatccgcgacctgcgcctcggcacgttcgacgtgctggtc
ggcatcaacctgctgcgcgaggggctcgacattccggaagtgtcgctggtcgcgatcctc
gacgcggacaaggaaggcttcctgcgcgcggagcgctcgctgatccagacgatcggccgc
gcggcgcgcaacgtgaacggcaaggcgatcctctatgccgacaacatgaccgagtcgatg
aagcgcgcgatcggcgaaaccgagcggcgtcgcgcgaagcagatcgcgcacaacgagaag
atgggcatcacgccgcgcggcgtcgtgaagcgcatcaaggacatcatcgacggcgtgtac
aacgccgacgacgcacgcgcggagctgaaggaagcgcaacagcgcgcgaagttcgaggac
atgtcggaaaagcagctcgcgaaggaaatcaagcggctcgaaaagcagatggccgactac
gcgaagaacctcgaattcgaaaaggccgcggcgacccgcgaccagctcgcgctgctgcgc
gagcgggtgttcggcgcgaacgtgggcgatcacgtgaatggcgcgggccggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system