KEGG   Burkholderia sp. 2002721687: BW21_5360
Entry
BW21_5360         CDS       T03759                                 
Name
(GenBank) DEAD_2 family protein
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
bul  Burkholderia sp. 2002721687
Pathway
bul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    BW21_5360
  09124 Replication and repair
   03420 Nucleotide excision repair
    BW21_5360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bul03021]
    BW21_5360
   03400 DNA repair and recombination proteins [BR:bul03400]
    BW21_5360
Enzymes [BR:bul01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     BW21_5360
Transcription machinery [BR:bul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     BW21_5360
DNA repair and recombination proteins [BR:bul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     BW21_5360
SSDB
Motif
Pfam: Helicase_C_2 DEAD_2 DEAD HD ResIII HBB
Other DBs
NCBI-ProteinID: AJY39405
Position
II:2046496..2048763
AA seq 755 aa
MSYVVAVRAMCEFTAREGDLDLRFTPAPSALEGIAGHATVAARRGAGYEKEIALSGEHRG
LTVRGRADGYDPALNRVEEIKTHRGDLARMPANQRALHWAQARVYGHLLCESRGLAELSV
ALVYFDVGTLRETVLTETHTAATLNACFAEQCERFVDWAAREDAHRVARDAALRALAFPH
ARFRSGQRELAVAAYRAARDGRALLAQAPTGIGKTLGALFPLLKACGEAHLDRLFFLTAK
TPGRALALDAADTLRAAADGALPLRVLELVARDKACEHPDAACHGESCPLARGFYDRLAA
ARAAALEHGRLDRATVRAAALAHDICPYYLAQELARWCDVVVGDYNYYYDGSALLHALAQ
QNQWRVGVLVDEAHNLLDRARGMYSAALDQRELAGVRKLAPAPLAKALERLNREWNALNR
EQAGAYVVHPDVPPRVLSAAQNLIGRFSELAAQVPLALDDAVLRFCFDAIHFVALAEQFG
THSIFDATRVRAPAPRRGGNASILCVRNVIPADFLAPRHEAARATVMFSGTLSPFDFYRD
TLGLPDDTGTLDVDGPFRAEQLTVKVASHVSTRWRDRERSLEPIVALIAAQYAARPGNYL
GFLSSFEYLQQVVARLRERHPALPVWEQAPGMDEAARDAFLARFEPNGQGIGFAVLGGAF
SEGVDLAGDRLIGAFVATLGLPQVNDVNEEMRRAMDARFGRGYDYVYLFPGLRKVVQAAG
RVIRTEHDEGVLHLIDDRFRRGEVRLLLPRWWRLS
NT seq 2268 nt   +upstreamnt  +downstreamnt
gtgagctacgtcgtcgcggtgcgcgcgatgtgcgaattcaccgcgcgcgagggcgatctc
gatctgcgcttcacacccgcgccgagcgcgctcgaaggcatcgccgggcatgcgacggtc
gcggcgcgccgcggcgccggctacgagaaggagatcgcgctgtcgggcgagcatcgcggc
ctcacggtgcgcggccgcgcggacggctacgatccggcgctgaaccgcgtcgaggaaatc
aagacgcatcgcggcgatctcgcgaggatgcccgcgaaccagcgcgcgctgcattgggcg
caggcgcgcgtgtacgggcatctgctgtgcgaatcgcgagggctcgcggagctgagcgtc
gcgctcgtctatttcgatgtcgggacgctgcgcgagacggtgctgaccgaaacgcacacg
gccgcgacgctgaacgcgtgcttcgccgagcaatgcgagcgtttcgtcgactgggcggcg
cgcgaggacgcgcatcgcgtcgcgcgcgatgcggcgctgcgcgcgctcgcgtttccgcac
gcgcgctttcgcagcggccagcgcgagctcgcggtcgccgcctatcgcgccgcgcgcgac
ggccgcgcgctgctcgcgcaggcgccgacgggcatcggcaagacgctcggcgcgctgttt
ccgctgctgaaggcgtgcggggaagcgcatctggaccggctcttcttcctgaccgcgaag
acgcccggccgcgcgctcgcgctcgacgcggccgacacgctgcgcgcggccgcggacggc
gcgctgccgctgcgcgtgctggagctcgtcgcgcgcgacaaggcgtgcgagcatccggac
gccgcgtgccacggcgaatcgtgcccgctcgcgcgcggcttctacgatcggctcgcggcc
gcgcgcgccgccgcgctcgaacacggccggctcgatcgcgcgacggtgcgcgcggccgcg
ctcgcgcacgacatctgcccgtactatctcgcgcaggagctcgcgcgctggtgcgacgtc
gtcgtcggcgactacaactattactacgacggcagcgcgttgctgcatgcgctcgcgcag
cagaaccagtggcgcgtcggcgtgctcgtcgacgaggcgcacaacctgctcgaccgcgca
cgcgggatgtacagcgcggcgctcgaccagcgcgagctcgccggcgtgcgcaagctcgcg
cccgcgccgctcgcgaaggcgctcgagcgcctgaaccgcgaatggaatgcgctcaatcgc
gagcaggcgggggcgtacgtcgtgcatccggacgtgccgccgcgcgtgctgtcggccgcg
cagaacctgatcgggcgcttctcggagctcgcggcgcaagtgccgctcgcgctcgacgat
gcggtgctgcgcttctgtttcgacgcgattcatttcgtcgcgctcgccgagcagttcggc
acgcattcgatcttcgatgcgacgcgcgtgcgcgcgccggcgccgcgccgcggcggcaac
gcgtcgatcctctgcgtgcgcaacgtgattcccgccgacttcctcgcgccgcgccacgaa
gccgcgcgcgcgaccgtgatgttctcgggcacgctgagcccgttcgatttctaccgcgac
acgcttgggttgccggacgacaccggcacgctcgacgtcgacgggccgtttcgcgccgag
caactgacggtgaaggtcgcgtcgcacgtgtcgacgcgctggcgcgaccgcgagcgctcg
ctcgagccgatcgtcgcgctgatcgccgcgcagtacgcggcgcggccgggcaactatctc
ggattcctgagcagcttcgagtatctgcagcaggtcgtcgcgcggctgcgcgagcgccat
ccggcgctgcccgtctgggagcaggcgcccggcatggacgaggccgcgcgcgacgcgttt
ctcgcgcgcttcgagccgaacgggcagggcatcggcttcgcggtgctgggcggcgcgttc
tcggagggcgtcgatcttgccggcgacaggctgatcggcgcgttcgtcgcgacgctcggg
ctgccgcaggtcaacgacgtcaacgaggagatgcggcgcgcgatggatgcgcgcttcggc
cgcggctacgactacgtctacctgtttccgggcttgcgcaaggtcgtgcaggcggcgggg
cgggtgattcgcaccgagcacgacgagggcgtgctgcatctgatcgacgaccgcttccgg
cgcggcgaagtgcggctgctgctgccgcgctggtggcggctgagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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