KEGG   Phocaeicola vulgatus: BVU_2249
Entry
BVU_2249          CDS       T00546                                 
Name
(GenBank) putative DNA polymerase III
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bvu  Phocaeicola vulgatus
Pathway
bvu03030  DNA replication
bvu03430  Mismatch repair
bvu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bvu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BVU_2249
   03430 Mismatch repair
    BVU_2249
   03440 Homologous recombination
    BVU_2249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bvu03032]
    BVU_2249
   03400 DNA repair and recombination proteins [BR:bvu03400]
    BVU_2249
Enzymes [BR:bvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BVU_2249
DNA replication proteins [BR:bvu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BVU_2249
DNA repair and recombination proteins [BR:bvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BVU_2249
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_22 DNA_pol3_gamma3 AAA_14 DNA_pol3_delta_C AAA_5 AAA_30 AAA_24 AAA_19 Mg_chelatase AAA_16 AAA_2 AAA_assoc_2 AAA_18 Rad17 RNA_helicase DNA_pol3_delta AAA_7 NTPase_1 nSTAND3
Other DBs
NCBI-ProteinID: ABR39908
UniProt: A6L2J4
Position
complement(2908442..2910253)
AA seq 603 aa
MENYIVSARKYRPATFESVVGQHALTITLKNAIATGKLAHAYLFCGPRGVGKTTCARIFA
KTINCQTPTAEGEACNQCESCLAFNEQRSYNIHELDAASNNSVEDIRSLIEQVRIPPQIG
KYKVYIIDEVHMLSQAAFNAFLKTLEEPPHHAIFILATTEKHKILPTILSRCQIYDFNRI
GIKDTIDHLQYVAKLEHINAEPEALTVIAQKADGGMRDALSIFDQVVSFTGGNITYKSVI
ENLNVLDYEYYFKLTDLLLENKVPESMLLFNDVLKKGFDGSHFITGLSSHFRDLLVSKDP
STLQLLEVGAGIRDRYKEQAQKCDQKFLYRAMKLCNDCDLNYRASKNKRLLVELTLIQCA
QLTLPDADDASGGRGPKKILKPLFTQQAASTAATQSQPQAKTAAAQTAATSAPQPQGTST
AGSMNASRPSPLPQTREEKKIPVFKAGSLGISLRRPLHEQQAAEKQEAKAASTAAQNDAT
YEDYIFNEKDLDYYWREFAAALPKEEKANSARMMNMHPHLLNDTTFEVTVDNDMVEKYMV
QLIPSVQNHLRERLHNRKITMTVRVSAPTENIRAYSHVERFQMMSKKNPNLLKLKEALGL
ELS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggaaaattatatcgtatcggcacgaaaataccgtcccgctacattcgaatcggttgta
gggcaacacgcgttgaccatcaccttaaaaaatgctattgccaccggcaagctggcacat
gcctacctgttctgcggaccgcgtggagtgggaaaaacaacgtgtgcacgtatctttgcc
aagaccatcaattgccagacccccactgccgaaggagaagcctgcaatcagtgtgagtct
tgtctggcattcaacgaacagcgttcttacaacatacatgagctggatgccgccagcaac
aactcggtagaagatatccgttcgctgattgagcaggtacgtatcccgccacaaatcggc
aagtacaaggtatatatcattgatgaggtccatatgttgtcgcaagccgccttcaatgct
tttctgaaaacattggaagaaccgcctcatcatgccatcttcatccttgccacaacggaa
aagcataagatactgccgactattctgagccgttgccagatttatgacttcaaccgcatc
ggcatcaaagacactatcgaccatctgcaatacgttgccaaactggaacatatcaacgcc
gaacccgaagccctgactgtcatcgcacagaaagccgacggcggtatgcgcgatgctctt
tccatcttcgaccaggtagtcagcttcacaggtgggaacatcacttataaaagtgtgatt
gaaaacctgaatgtcttggattacgaatattatttcaagctgaccgatttgttgcttgaa
aacaaagttcccgaatccatgctgctttttaacgacgtattgaaaaaaggatttgacggc
agtcatttcatcaccggactatcctctcatttccgggatttgctggtgagcaaggaccct
tccaccctgcaattgctggaagtaggcgccggtatccgcgaccgctataaagaacaagca
caaaaatgcgaccagaaattcctgtaccgtgccatgaagctatgcaatgattgtgacctg
aactatcgtgcaagcaaaaacaaacgtctgctggtagaactgacactgattcaatgcgcc
caactcactctgcccgatgccgacgatgcaagtggtgggcgtggccctaagaagatatta
aaacccctatttacgcagcaagcggcttccacagccgccacgcagtcacagcctcaggct
aaaactgccgctgcacagaccgcagcaacctccgctcctcagccacagggtacaagtaca
gccggcagtatgaacgcaagccgtccaagcccgctgcctcagaccagagaagagaaaaaa
atcccggtgttcaaggcgggctcactcggtatatccctgcgccgtcctttgcacgaacag
caagccgcggagaagcaagaagcaaaagcggcaagcaccgctgcccaaaacgatgccaca
tacgaagattatattttcaatgaaaaagatctggactattactggcgtgaatttgcagcc
gccctgcccaaggaagagaaggctaactccgcacgaatgatgaacatgcatccgcatttg
ttgaatgacacgacttttgaagtgacagtagacaatgatatggtggaaaaatatatggta
caattgataccatcggttcagaatcacttacgcgaacgtctgcacaaccggaaaatcacc
atgacggtacgtgtcagtgcccctaccgagaacatccgtgcttacagccacgtggaacgt
ttccagatgatgagcaagaaaaacccgaatctgctgaaattaaaagaagcactgggattg
gagttatcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (35)   

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