KEGG   Caballeronia sp. SBC2: SBC2_24440
Entry
SBC2_24440        CDS       T06459                                 
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
caba  Caballeronia sp. SBC2
Pathway
caba03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caba00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SBC2_24440 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caba03019]
    SBC2_24440 (pnp)
   03016 Transfer RNA biogenesis [BR:caba03016]
    SBC2_24440 (pnp)
Enzymes [BR:caba01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SBC2_24440 (pnp)
Messenger RNA biogenesis [BR:caba03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SBC2_24440 (pnp)
Transfer RNA biogenesis [BR:caba03016]
 Prokaryotic type
  tRNA degradation factors
   SBC2_24440 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2
Other DBs
NCBI-ProteinID: QIE24404
Position
complement(2702150..2704291)
AA seq 713 aa
MFKKIVKEFKWGQHNVRLETGEIARQAGGAVIVDIEDTVVLATVVGAKTAKPGQDFFPLT
VDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVLSL
NPDVPADIPALIGASAALAISGLPFNGPVGAARVAYINNEFVLNPTRPQMKESALDLIVA
GTERAVLMVESEAQQLTEEVMLAAVVFGHDQMQVAIDAIHELVAEGGKPEWDWTPAPKNE
PLIARVTELAQAELNAVYQIRDKSARTAKLKEVYAATTAKLTEEAVAKGETPADKASIGN
VMFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVIAT
LGTKGDEQNIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALAACL
PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF
AVLTDILGDEDHLGDMDFKVAGTAQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG
KMTTAVPGTNTNLSDYAPRMITMKINPEKIRDVIGKGGSVIRALTEETNTTIDISDDGVV
TIASTSSEGMAEAKKRIENITAEVEVGQVYEGPVLKLLDFGAIVNILPGKDGLLHISEIV
NERIKDINDYLKEGQIVKVKVIQTDEKGRVRLSAKALLNEGGAPIEPIQPTQQ
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgtttaaaaagatcgtcaaggaattcaagtggggacaacacaacgttcgcctggaaaca
ggtgaaatcgcgcgccaggctggcggcgcggtcatcgttgatatcgaagataccgtggtg
ctcgcgacggttgtcggcgcgaaaacggcaaagccgggtcaagacttcttcccgctgacc
gtcgactatctggaaaagacctacgcagccggcaagatcccgggtggtttcttccgtcgc
gaaggccgtccgtcggaaggtgagacgctgatctcgcgtttgatcgaccgtccgttgcgt
ccgctgttccccgaaggcttctacaacgaagtccaggttgtgattcacgtgttgtcgctg
aatccggatgtgcccgctgacattcctgcgctgatcggcgcatcggcggccctggctatc
tccggcttgccgttcaacggcccggtgggcgccgctcgcgtcgcgtacatcaacaacgaa
ttcgtgctgaatccgacccgtccgcagatgaaggaatcggcactcgatttgatcgtcgcc
ggtacggagcgcgcggtgttgatggtggaatcggaagcgcagcaactgaccgaagaagtc
atgctggccgctgtggtgtttggtcatgaccagatgcaagtggctatcgacgcaatccac
gaactggtcgccgaaggtggcaagccggaatgggattggacgccggcgccgaagaacgag
ccgctgatcgcacgcgtgacggaactggcgcaagccgaactgaacgccgtgtaccagatc
cgcgacaaatcggctcgcaccgcgaagctgaaggaagtctacgcagcaacgaccgcaaag
ctgaccgaagaagctgttgccaagggtgagacgccggctgacaaggcgagcatcggcaac
gtgatgttcgacatcgaagcaaagatcgtccgtacgcagatcctgaacggcgaaccgcgt
attgacggccgcgacacgcgcaccgtccgtccgatcgaaatccgtaccggcgtgctgccg
cgtacgcacggttcggctttgttcacgcgcggagaaacgcaagcgctcgtgatcgcgacg
ctgggcacgaagggcgacgaacagaacatcgacgcgctcgaaggcgagtatcgcgaacgc
ttcatgcttcactacaacatgcctcctttcgcgaccggcgaaacgggtcgcgtcggttcg
ccgaagcgccgcgaaatcggtcacggccgtctggccaagcgcgcattggcggcttgcctg
ccaagcgccgacgaattcggctactccatccgcgttgtgtcggaaatcacggaatcgaac
ggttcgtcgtccatggcttcggtctgcggcggctgtctcgcgctgatggacgctggggtg
cccatgaaggcgcacgtcgcgggtattgcgatgggcctgattctggaaggcaacaagttt
gcagtattgaccgacatcctgggcgacgaagatcacctcggcgacatggacttcaaggtg
gcgggcacggcgcaaggcgtgacggcgcttcagatggacatcaagatccagggcatcacg
aaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcatatcctcggc
aagatgacgaccgctgttccgggtacgaacacgaacctgtcggactatgcgccgcgcatg
atcaccatgaagatcaatccggagaagatccgcgacgtgatcggcaagggcggttcggta
atccgtgcgttgaccgaagaaaccaacacgaccatcgacatttcggacgacggcgtggtg
actatcgctagcacgagcagcgaaggcatggcggaagcgaagaagcgcattgagaacatc
acggctgaagtggaagtgggccaggtctacgaaggcccggtactcaaattgctggacttc
ggcgcgatcgtgaatattcttccgggtaaggatggtctgctgcacatctcggaaatcgtc
aacgagcgcatcaaggacatcaacgactacctgaaggaaggccagatcgtgaaggtcaag
gtcatccagacagacgaaaagggtcgtgttcgtttgtcagcgaaggctttgttgaacgaa
ggcggcgcgcctatcgaaccgatccagccgacgcagcagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system