KEGG   Cicer arietinum (chickpea): 101488233
Entry
101488233         CDS       T02819                                 
Name
(RefSeq) eukaryotic initiation factor 4A-3
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03013  Nucleocytoplasmic transport
cam03015  mRNA surveillance pathway
cam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101488233
  09122 Translation
   03013 Nucleocytoplasmic transport
    101488233
   03015 mRNA surveillance pathway
    101488233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101488233
   03041 Spliceosome [BR:cam03041]
    101488233
   03009 Ribosome biogenesis [BR:cam03009]
    101488233
   03012 Translation factors [BR:cam03012]
    101488233
Enzymes [BR:cam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     101488233
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101488233
   mRNA cycle factors
    Stress granule specific factors
     101488233
Spliceosome [BR:cam03041]
 Complex C
  Other components
   EJC/TREX
    101488233
Ribosome biogenesis [BR:cam03009]
 Eukaryotic type
  90S particles
   Helicases
    101488233
Translation factors [BR:cam03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    101488233
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_30 Helicase_RecD AAA_22 UvrD-helicase
Other DBs
NCBI-GeneID: 101488233
NCBI-ProteinID: XP_004487929
UniProt: A0A1S2XH23
Position
Ca1:complement(19042454..19047108)
AA seq 406 aa
MAATSVVPANRRRTVNASEDMDFETTEGVTAIGSFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVAPIIQGRDVIAQAQSGTGKTSMIALTVCQIVDTSVREVQALIVSPTRELASQTEKV
ILAIGDFINIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVCLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTVTQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQRERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVALNFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq 1221 nt   +upstreamnt  +downstreamnt
atggcggcaacttcggtggttccggcgaatcgtcggagaacagttaacgcctctgaggat
atggatttcgagacgacggagggtgtgacggcgattggaagcttcgaggagatgggaata
aaagacgatttgcttcgtggaatctaccaatacggtttcgagaaaccctccgcgattcaa
cagcgtgccgttgcgcctatcattcagggacgtgatgttatcgctcaggctcaatctgga
accggcaagacgtccatgattgcgcttacggtttgccagattgttgatacatccgtcaga
gaagtgcaagctttaattgtgtctccaacaagggagctggcctcacagactgaaaaagtt
atattggctattggggatttcataaatatacaagcgcatgcttgcattggaggcaaaagt
gtaggagaagatataaggaaacttgagcatggagttcatgtggtgtctggaactcctggt
cgagtctgtgacatgatcaaaaggagaacattgcgcacaagagctatcaagttgctagtt
ctggatgaatctgatgaaatgttgagcagagggtttaaagatcaaatttatgatgtgtat
agatatctcccaccggatcttcaggtttgcttgatttctgctacactacctcatgaaatt
ctggagatgacaaataagtttatgacagatcccgtgaggatccttgtaaaacgtgatgaa
ttgacattggagggcatcaagcaattttttgttgcggttgaaagggaggaatggaagttt
gatactctgtgtgatctttatgatacacttaccgtcactcaagctgtgatattctgtaac
accaagcgaaaggtggactggttaactgaaaaaatgcgcaacaataattttactgtctca
tcaatgcacggtgacatgcctcaaagagaaagagacgcaattatgggagaattccgttct
ggaacaacccgagtattgataacaactgatgtttgggctcgtggccttgatgtacagcag
gtttctctagttattaattatgatcttccaaataatcgagagctgtacattcatcggatt
ggtcgctctggacgttttggacgcaagggtgttgccttaaattttgttaaaagcgatgat
atcaagatcttgagagatattgagcaatattacagtactcagattgatgagatgccaatg
aatgttgctgatcttatataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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