KEGG   Collimonas arenae: LT85_2873
Entry
LT85_2873         CDS       T03512                                 
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
care  Collimonas arenae
Brite
KEGG Orthology (KO) [BR:care00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:care03009]
    LT85_2873
Enzymes [BR:care01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     LT85_2873
Ribosome biogenesis [BR:care03009]
 Prokaryotic type
  ribosomal protein modification factors
   LT85_2873
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM CLP1_P
Other DBs
NCBI-ProteinID: AIY42031
UniProt: A0A0A1FBV5
Position
complement(3213336..3214718)
AA seq 460 aa
MSTVIPAASAAPATAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYEGADLVIVNT
CGFIDAAVQESLDAIGEALSENGKVIVTGCLGAKKDADGDDIIQKIHPKVLEVTGPHAVG
EVMFAVHKHLPKPHAPFIDLLPPQGIKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVS
RPIADIMMEAENLFKAGVKELLVISQDTSAYGVDVKFRMGFWNGKPVKTHMTQLVTALGE
IAAQYGAWVRLHYVYPYPHVDQIIPLMAEGKVLPYLDVPLQHAHPDVLKRMKRPASGEKN
IERIQAWRAMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATA
NALDNPVPEELREERRGRVMQLQEEISKKRLQAKVGKTMRVLIDSVDRSGGVGRSSADAP
EIDGVVYVKPPYEPHKKLVVGEFVDVTITASDAHDLWAAA
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgtccacagtcattccagcagcgtcagctgcacctgcaacagcccctaaagtcggtttc
gtctcccttggttgccctaaggcactggttgattccgaacaaatccttactcaattgcgt
gcggaaggttatgaaactgccaagtcttatgagggcgctgacctggtcatcgtcaacact
tgcggttttatcgacgctgctgtgcaggagtcgctggacgccatcggcgaggcgctgagc
gaaaacggcaaggttatcgttaccggttgcctgggcgcgaaaaaagacgccgacggcgac
gacatcattcaaaagattcacccgaaagtgctggaagtgaccggcccgcatgctgtcggc
gaagtcatgtttgctgtccataagcatttgccgaagccgcatgctccgttcatcgatttg
ttgccgccgcagggcatcaagctgacgcccaagcattttgcttatctgaagatatcggaa
ggctgtaaccaccgttgcagcttctgcatcattccgtcgatgcgcggcgacctggtgtcg
cgtccgatcgccgatatcatgatggaagccgagaatctgttcaaggctggcgtcaaggaa
ttgctggtgatttctcaagacaccagcgcctacggcgtcgatgtcaagttccgcatgggt
ttctggaacggcaagccggtcaagacccacatgacgcaactggttaccgcactgggcgag
atcgctgcgcaatacggcgcctgggtccgtctgcactacgtttatccctatccgcacgtc
gatcagatcatcccgttgatggccgaaggcaaggtgctgccatacctggatgtgcctttg
caacatgcgcatccggatgtcctgaagcggatgaagcgcccggccagcggcgaaaagaat
atcgagcgcatccaggcctggcgcgcgatgtgtccagatctgacgatccgctctaccttt
atcgccggctttccgggcgagactgaagctgaatttgaatatctgctggacttcctgaaa
gaggccgagatcgatcgtctcggttgctttgcctattctccggtagaaggtgcgaccgcc
aatgcgctggataatccggtgccggaagaactgcgcgaagaacgccgcggccgcgtcatg
cagttgcaggaagagatttccaagaagcgcttgcaagcgaaggtcggcaagaccatgcgc
gtgctgatcgattccgtcgatcgcagcggcggcgtcggccgttccagcgccgatgcgcct
gaaatcgatggcgtggtctacgtcaagccgccgtacgaaccgcacaagaagctggtggtc
ggtgagtttgtcgatgtcaccattactgcatccgatgcgcatgatttatgggcagctgca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system