KEGG   Collimonas arenae: LT85_3954
Entry
LT85_3954         CDS       T03512                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
care  Collimonas arenae
Brite
KEGG Orthology (KO) [BR:care00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:care03016]
    LT85_3954
Enzymes [BR:care01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LT85_3954
Transfer RNA biogenesis [BR:care03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LT85_3954
 Prokaryotic type
    LT85_3954
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AIY43112
UniProt: A0A0A1FJN4
Position
complement(4460142..4461152)
AA seq 336 aa
MLVTAGRFCFSSPFFVFATMASRPPKRIRVPLNGVLLLDKPVGFSSNDALIKAKGLLNAQ
KAGHTGTLDPFATGVLPLCFGEATKFAQDLLDTDKTYETLIHLGVSTTTGDTEGEVQERK
DVNVSLEQIDAVLAQFRGPIKQVPPMYSALKRDGKPLYEYARAGIVLEREARDVTIHSLE
FLAYDAPFLRLRVSCSKGTYIRVLGEDIGAALGCGAHLQELRRTQVGHLTLEGCVTLEQL
SGTEAAERCTLLAPVDSLLLTFPEVLLSEALAKRFLQGQRLTLSKEGVALPEQGGRVRVY
QQPADEMSFRQLLGTAQLHEYGVLAPERLIATAQLI
NT seq 1011 nt   +upstreamnt  +downstreamnt
ttgctggtaacggcaggccgtttctgcttttcttcacctttttttgtattcgctaccatg
gcatcacgtccacccaaaagaatccgtgtcccgctcaatggcgtattgctgttggataag
cctgtcggcttttccagtaacgacgcgctgatcaaggccaaaggcttgctgaatgcacag
aaggccggtcacaccggtactcttgatccgttcgccaccggcgtactgccgttgtgcttc
ggcgaagccaccaagttcgcccaggatttgctggataccgacaagacttatgaaaccttg
atccacctgggagtgagtactaccaccggggataccgaaggcgaagttcaggagcgaaag
gacgtcaacgtcagcctcgagcagattgatgcggtgctggcgcagttccgcggcccgatc
aagcaagtgccgccgatgtactcggcgctgaaacgcgacggcaagcctttgtatgaatat
gcacgcgctggtattgtcttggagcgcgaagcgcgtgatgtaaccattcactcacttgaa
ttcctggcctacgacgcgccgttcctgcgtttgcgggtaagttgcagcaaaggtacctac
atccgtgtcttgggcgaagatatcggcgctgcgctgggctgtggcgcacatttgcaagag
ttgcgccgtacccaggtcggccatctgacgctggaggggtgcgtcaccctggagcagttg
agcgggactgaagccgccgaacgttgtaccttgctggcgccagtcgatagcttgctgcta
acttttccagaggtattgctatcggaagcactggccaagcgctttttgcaaggccagcgc
ctgacgctgtcgaaagagggcgtagccttaccggagcagggcggccgagtacgggtctac
cagcagccagcggatgaaatgtcttttcggcaattactgggcaccgcgcagctgcatgaa
tatggcgtcctagcgcccgagcgcctgattgccacggcgcagctcatataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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