KEGG T03614: SRAA

Serpentinimonas raichei: SRAA_1874

Entry

SRAA_1874         CDS       T03614

Symbol

uvrA

Name

(GenBank) excinuclease ATPase subunit

K03701

excinuclease ABC subunit A

Organism

cbaa Serpentinimonas raichei

Pathway

cbaa03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:cbaa00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SRAA_1874 (uvrA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbaa03400]
    SRAA_1874 (uvrA)
DNA repair and recombination proteins [BR:cbaa03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SRAA_1874 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SRAA_1874 (uvrA)

SSDB

Motif

Pfam:

UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_21 RsgA_GTPase AAA_22 AAA_23 nSTAND3 DnaJ_CXXCXGXG APS_kinase AAA_25 Viral_helicase1 DUF3667

Other DBs

NCBI-ProteinID:

BAO81728

UniProt:

A0A060NQC6

Position

2004319..2007306

AA seq 995 aa
MNPDHLTAATAAEPAAAIDSGTPLAQALRQPAAMLRVRGARTHNLKNIDLDIPKNALVVI
TGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQRLDKPDVDLIEGLAPAIAIEQKA
TSHNPRSTVGTVTEIHDYLRLLYARVGTPHCPEHGQALQAQTVSQMVDQVLALPPDTKVL
LLAPIARARKGEFADTLAELQAQGFVRFRLDGQVLEAERLPALKRTGKHDLDVVIDRLKV
RPGAPADAAAEQRQRLAESFETALRLGEGKALVLELDSGREHLLSARFACPQCAYALDEL
EPRLFSFNSPLGACPGCEGLGHVERFDPARVVAFPSLSLAAGAIKGWDRRNAQAFGVLQN
LAAHYAFELDTPWENLPEAVHQVLLHGSGTQEIAFDYAFDAGQTVRKHHPFEGLLPNLER
RWRESSNPTVREELARQRSTQVCPQCHGSRLRPQARHVYVGQGEQARAIYQIGQITLAQA
LHWFESLQLHGAKAEIGARVRREIAARLQFLNDVGLGYLSLERSAETLSGGEAQRIRLAS
QIGSGLSGVLYVLDEPSIGLHQRDNERLIGTLMRLRELGNSVLVVEHDEDMIRAADHVID
LGPGAGVHGGRVMAQGSCAQLMATPGSLTGAYLSGARRIEVPKQRKAFDPVSGAALRLLQ
ASGHNLRAVSTAFPVGLFTCVTGVSGSGKSTLVNDTLYRAVARHLYRSHDEAAPHQGLEG
LEHFDKVINVDQSPIGRTPRSNPATYTGLFTGIRELLAEVPAARERGYGPGRFSFNVAQS
AGGGRCEACQGDGVVKVEMHFLPDVYVACEVCQGQRYNRETLAVQYKGKHIAQILELTVE
QASAFFQAVPALQRKLQTLLDVGLGYLRLGQSATTLSGGEAQRVKLALELSKRDTGRTLY
VLDEPTTGLHFADIELLLKVLHQLRDAGNTIVVIEHNLDVIKTADWLIDLGPEGGAGGGQ
ILVCGTPEQVAACPGSHTGRFLQRGLLGPQACASL

NT seq 2988 nt +upstreamnt +downstreamnt
ttgaacccagaccacctcaccgctgccactgcggccgaacccgctgccgccattgacagc
ggcaccccgctggcgcaggcgctgcgccagcctgccgcgatgctgcgcgtgcgcggcgcg
cgcacccacaacctgaaaaacatcgacctcgacatcccgaaaaacgcgctggtggtgatc
accggcctgtcgggttcgggcaagtccagcctcgccttcgacaccctgtacgccgagggc
cagcgccgctacgtcgagagcctgagcgcctacgcgcgccagtttttgcagcgcctcgac
aagcccgacgtcgatctgatcgagggcctggcgccggccatcgccatcgaacaaaaagcc
accagccacaacccgcgctcgaccgtgggcaccgtgaccgaaatccacgactacctgcgc
ctgctctacgcccgcgtcggcaccccgcactgccccgagcacggccaggcgctgcaagcg
cagaccgtgagccagatggtggaccaggtgctggcgctgccgcccgacaccaaggtgctg
ttgctggccccgattgcgcgcgcccgcaagggcgagttcgccgacaccctggccgagctg
caagcgcaaggcttcgtgcgcttccggctcgacggccaggtgctggaggccgagcgcctg
cccgcgctcaagcgcaccggcaagcacgacctcgacgtggtgatcgaccgcctcaaggtg
cgccccggcgcacccgccgacgcagccgccgaacagcgccagcggctggccgagagcttc
gagaccgcgctgcgcctgggcgaaggcaaggcgctggtgctggagctcgacagcgggcgc
gagcacctgctgagtgcgcgctttgcctgcccgcagtgcgcctatgcgctcgacgaactg
gagccgcgtttgttctccttcaactcgccgctgggtgcctgccccggctgcgagggcctg
ggccacgtggagcgcttcgaccccgcgcgcgtggtggccttccccagcctgagcctggcc
gctggggccatcaaaggctgggaccggcgcaacgcccaggcctttggcgtgttgcaaaac
ctggccgcacactacgccttcgagctcgacacgccgtgggaaaacctgcccgaagcggtg
caccaggtgctgctgcacggctcgggcacgcaagaaattgccttcgactacgccttcgac
gccggccagacggtgcgcaaacaccaccccttcgagggcctgttgccgaacctagagcgg
cgctggcgggaaagcagcaaccccaccgtgcgcgaagagctggcgcgccagcgcagcacc
caagtctgcccgcagtgccacggcagccgcctgcggccgcaggcgcgccatgtgtacgtg
ggccagggcgagcaggcacgcgccatctaccagatcggccagatcacgctggcgcaggcg
ctgcattggttcgaatccttgcagttgcacggggccaaagccgagatcggggcccgagtg
cggcgcgaaatcgcggcccggctgcagtttctcaacgacgtcgggctgggctacctgagc
ctcgagcgcagcgccgagaccctgagcggcggcgaggcgcagcgcatccgcttggccagc
cagatcggctctgggctctcgggcgtgctgtacgtgctcgacgagcccagcatcggcttg
caccagcgcgacaacgagcgcctgatcggcaccctgatgcgcctgcgcgagctcggcaac
agcgtgctggtggtcgagcacgacgaagacatgatccgcgccgccgaccacgtcatcgac
ctcggccccggcgccggcgtgcacggcgggcgcgtcatggcccagggcagctgcgcccag
ctcatggccacgccgggctcgctcaccggcgcctacctctcgggcgcgcggcgcatcgag
gtgcccaagcagcgcaaagccttcgacccggtcagcggcgcggcgctgcgcctgctgcaa
gccagcggtcacaacctgcgcgcggtcagcaccgccttccccgtcgggctgttcacctgc
gtcacgggcgtcagcggctcgggcaaatcgaccctcgtcaacgacaccctgtaccgcgcc
gtggcgcgccacctctaccgcagccacgacgaagcggcgccgcaccaaggcctagagggg
ctggagcatttcgacaaggtcatcaacgtcgatcaaagcccgatcgggcgcaccccgcgc
agcaacccggccacctacaccggcctttttaccggcatccgcgagctgctggccgaggtg
ccggcggcgcgcgagcgcggctacggcccggggcgcttttcgttcaacgtggcgcagtca
gccggcggcggccgctgcgaagcctgccagggcgacggcgtggtcaaggtcgagatgcac
ttcctgcccgatgtctatgtggcgtgcgaggtctgccagggccagcgctacaaccgcgaa
acgcttgctgtgcagtacaagggcaagcacatcgcgcagattctggagctcacggtcgag
caggccagcgccttcttccaagccgtgccggcgctgcagcgcaaactgcaaaccctgctc
gacgtcgggctgggctacctgcgcctgggccagagcgcgaccacgctctcgggcggcgag
gcgcagcgcgtcaagctggcgctcgagctctcgaagcgcgacaccggccgcaccctctac
gtgctggacgaacccaccaccggcctgcacttcgccgacatcgagctgctgctcaaggtg
ctgcaccagctgcgcgacgccggcaacaccatcgtggtgatcgagcacaacctggacgtg
atcaaaaccgccgactggctcatcgacctcggccccgaaggcggcgccggcggtggccag
atcctggtctgcggcacccccgagcaagtggcggcctgccccggcagccacaccgggcgc
tttttgcagcgtggcctgcttgggccgcaggcctgcgcctcactttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (32)   

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