KEGG   Castor canadensis (American beaver): 109680338
Entry
109680338         CDS       T04791                                 
Symbol
Polq
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
ccan  Castor canadensis (American beaver)
Brite
KEGG Orthology (KO) [BR:ccan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccan03400]
    109680338 (Polq)
Enzymes [BR:ccan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109680338 (Polq)
DNA repair and recombination proteins [BR:ccan03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    109680338 (Polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4606 Helicase_dom4_arc HHH_5 DUF4332
Other DBs
NCBI-GeneID: 109680338
NCBI-ProteinID: XP_020010814
UniProt: A0A8B7TSY0
Position
Unknown
AA seq 2590 aa
MNLQRRSVKRRRSASGSDSLSGGGGDNSVGSLHLSGPVLSPPPGLGRSLKAAGAGVCKQT
VLDDQIDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAG
KTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPTRH
FSSLDIAVCTIERANGLVNRLIEENEMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI
TQKSASCQVGSASPLSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLELVKIGN
SVYDSSMKVVREFQPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADTIARE
FCNLHQQAEGLVKPSEFPPVILEQKGLLEVMDQLKRSPAGLDLMLQKTVPWGVAFHHAGL
TFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFSGRPLDILTYKQMVGR
AGRKGVDTMGESILICKNSEKSKGIALLQGSLKPVHSCLQRREGEEVTPSMIRAVLEIIV
GGVANTSQDVQTYVSCTFLAASMKEGKQRIQRNQDSVQLGAIEACVMWLLENEFIQVSEA
SDGTGGKVYHSTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHIVYLVTPMFED
WITIDWYQFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERHHRQMAIHKRFF
TSLVLLDLISEIPLKEINQKYGCSRGQIQSLQQSAAVYAGMITVFSXRLGWHNMELLLSQ
FQKRLTFGVQRELCDLVRVSLLNAQRARFFYASGFLTVADLARASIAEVEIVLKNAVPFK
SARKAVDEEEEAVEERRNMRTIWVTGRKGLTAREAAALIVEEAKLILKQDLIEMGVQWDL
CSPLSSGTHSLTSSESEAQEHMFIPQSMSSPKRLASKNKSNRRFSDSYVKHSPSIVQDLD
KIGEHTSSFHYTFQEGNQKHHRHSIFRARKQASLDINKEKLRTSLNEEQTSPRKALPTFS
LEKTKKAALNFSSEQMSGSFQSWKHRKHQKQCSNSNPVEDSGMHRVDLQGQTMSRPILCE
DSLTMNEKNMQFRNPGPFGKNVSFCAAEKYSKTSCLLKTEQSCLKKRTLVNDTQTTINDI
LVKHFCTGSLSKNVTYQTTSVASKNEKGSSIVETEKISEVLIQNDSTKQNVSVKYHETHP
ISQCLEKQCNKQTNTYIKQKNIVERQMSCEAVSSYIHKDSSVTRVKCGSLKLNKENNPNH
FQALEVEISRTESTGAFSKSRGQHKDFLNSSRIQEKTDNYITNNIGNNHVSDLGLVLCDF
EDSFYLDTQSEKIIQQMTDENSKQRTKGTNLVAGIMHSSSDKQNCMNNFQNKYHFTSPCE
HHSSVVTNPDHLNLKTVDTMTQSAEHGVDRLTPKSLIFHSPILLGENDPCFKGNELSVTD
SQLNSFLQGYQTQETVKSVIPLTSQKRTPTGVEREYLPDPEKSLNMSDSLLFDSYSEDFL
VKEQSPNVQTKEPLPSKITSNHVSDSLHLQEDTIKNGNMNEHQGIQQLTCCNDESVIFSE
IESVQLVEALDNVAIFPVPEKPSTALSLRALELSDSAVIANSYPQGEVIGRDRDEGTQKS
KLIGTRHNNSLIWSGASFVLSPGLQRILDKVSRPLENENAITVNLSCLKEKNTELNERQE
VISNLETYQVQGISFFPNNEIKSKILGTRENNPSQGETSSSLPSKESSIGDDNGLIPPTP
SPTFSKLAFPEILGTSVKLQKSSSVLQPGEIYLFSSPSDIKKHDLSPETRNSFKDDSPMR
DTSFSVQLSQDGLQLTPASFNSESLAIIDVASDQTLFQTFIKEWQCKKRFSISLACEKIR
SLTSSKIATIGGRFKQVSLLQETLIRDDGFPVQGSDDILVVGLAVCWGGRDAYYFSLQKE
QTHSEISASLAPPSLDPNLTVKERLRYLQSCLQKESDKERSVIIYDFIQSYKILLLSCGI
SLEQSYEDPKVACWLLNPDSKEPTLHSIVTSFLPHELPLLEGIETGQGIRSLGLNASIEY
SGRYRASIESILTFNSMNELNSLLQKENLHDVFHKVEMPSQYCLALLELNGIGFSTAECE
SQKHIMQAKLDAIEAQAYQLAGHSFSFTSADDIAEVLFLELKLPPNGEMKIQGSKKTLGS
TRRGNDSGRKLRLGRQFSTSKDVLKKLKELHPLPGLILEWRRISNAITKVVFPLQREKRL
NPFLGMERIYPVSQSHTATGRITFIEPNIQNVPRDFEIKMPTLVGESPPSQALGKGLLPM
VRGHSKKSCGLHPGYQALMGEKASDRGVPFSVSMRHAFVPFPGGLILAADYSQLELRILA
HLSHDRRLIHVLNTGADVFRSIAAEWKMIEPESVGDDLRQQAKQICYGIIYGIGAKSLGE
QMGVKENDAACYIDSFKSRYTGIKNFMRETVKNCKRDGFVQTILGRRRYLPGIKDNNPYH
KAHAERQAINTTVQGSAADIVKVATVNIQKQLETFHSTFKSHGHWEGMLRNDRTELLPKR
RLQGMFCPTRGGFFILQLHDELLYEVAEEDVVQVAQIVKNEMESAIKLSVKLSVKVKIGA
SWGELKDFDV
NT seq 7773 nt   +upstreamnt  +downstreamnt
atgaatcttcagcgccggagtgtaaaacggcgacgttcagcgtcaggctcggactcgctc
tcgggaggcggcggtgacaacagtgtcggctctctgcatctttccgggccggtactgagt
ccaccccccggcctgggacgcagcctgaaggcggcaggtgcaggggtatgcaagcaaacg
gttcttgatgaccaaatagacaagctgctattggcaaactggggacttcctaaagcagtt
ctggagaaatatcacagttttggtgtaaagaagatgtttgaatggcaagcggaatgcctt
ttgcttggacaagtcttggagggaaagaatttagtttattcagctcctacaagtgctggg
aagactcttgttgcagaactacttattttgaagcgggttttggaaatgcgaaagaaagct
ttgtttattcttccctttgtttctgtagccaaagagaagaaatactatctccagagtctg
tttcaggaagtaggaataaaagtagatggttatatgggcagtacctctccaacaaggcat
ttctcttctttggatattgctgtctgcacaattgagagagccaatgggctggttaatcgc
ctcatagaggaaaatgagatggatttgttaggaatggtggttgttgatgaattacacatg
ctaggagactctcaccgagggtatctactggaacttctgctgaccaagatttgttatatt
actcagaagtcagcatcttgtcaggtaggttcagctagtcctctgtcaaacgctgtgcag
attgttggcatgagtgctactcttcctaatttggagcttgtggcttcctggttgaatgct
gaactctaccatactgactttcgtcctgtaccacttttggagttagtaaaaattggaaat
tctgtatatgattcttcaatgaaagttgtgagggaatttcaacccatgctacaagtgaag
ggagatgaggaccacgttgttagtttatgttatgagaccatttgtgataaccattcagta
ttacttttttgtccatcaaaaaaatggtgtgagaaactggcagacaccattgcccgagag
ttttgtaatctgcaccaacaagctgagggattggtaaaaccatctgaatttccaccagtg
attctagaacaaaagggcctcttggaagtgatggatcagttaaaacggtcccctgcaggt
ctggacttaatgttacaaaaaactgtaccatggggagtagcatttcatcatgcaggtctt
actttcgaggagagggatatcattgaaggagccttccgtcaaggtctcattcgggtcttg
gcagcaacttctactctttcttctggggtgaatttacctgcacggcgtgtgattattcgg
actccaattttcagtggtcgccctctagatattctaacttacaagcagatggttggccgt
gctggcagaaaaggagtagatacaatgggtgagagtatcttaatttgtaagaactctgag
aaatcaaaaggcattgctctacttcagggatctctaaaacctgttcacagttgtctgcaa
agacgagaaggagaagaagtaactccaagcatgatacgagctgttttggagataatagtt
ggtggagtggcaaatacatcacaagatgtgcagacttatgtttcttgcacatttttggct
gcaagtatgaaagaaggaaagcagagaattcagagaaatcaagattctgttcaacttgga
gcaattgaagcctgtgtgatgtggctgctagaaaatgaattcatccaggtttcagaagcc
agtgatggaacaggaggaaaggtgtatcattcaacacatcttggatcagctactctttca
tcttcactctctccagctgataccttagatatttttgctgacctccaaagagcaatgaag
ggctttgttttagagaatgaccttcatattgtgtatctggttacacctatgtttgaagac
tggattactatagattggtatcaattcttctgtttatgggagaagttgccaacttctatg
aaaagggtggcagagttagtgggagttgaggaagggttcttggctcgctgtgtgaaagga
aaagtagtagccagaactgagagacatcaccgacaaatggccatccataaaaggtttttc
accagccttgtgctattagatttaatcagtgaaattcccttaaaggaaattaatcaaaaa
tatggatgcagtcgtggacaaattcagtctttgcaacagtcagctgcagtttatgcaggg
atgattacagtgttttccnatcgtctgggctggcacaacatggaactactactttcccag
tttcagaagcgtcttacattcggcgtccagcgggaactgtgtgacctggttcgggtatcc
ttacttaacgcacagcgagccaggttcttctatgcttctggctttcttactgtggcagat
cttgctagagcaagtattgctgaggtggaaattgttctgaaaaacgctgtgcctttcaaa
agtgcccggaaggcagtggatgaggaagaggaagcagttgaagaacgtcggaatatgcga
actatttgggtgactggcagaaaaggtttaactgcaagggaagcagcagccctaatagtg
gaagaagccaaactgattctgaagcaggacttaattgaaatgggagtacaatgggatctg
tgttctcctctgagttctggtacacattcactgaccagtagtgagtcagaagcacaggag
catatgtttataccccaaagtatgagttctcctaaaagattagcatcaaagaacaaaagc
aatagaagatttagtgattcttatgttaagcattcaccaagtatagtgcaagatttagat
aaaattggagagcatacaagttcctttcattatacattccaggaggggaatcaaaaacat
catagacattccattttcagagcaagaaaacaggcttctttggatataaataaggagaag
ctcagaacctctctgaatgaggaacaaacaagccctaggaaagctcttccgactttctcc
ttggagaaaaccaaaaaagcagctttgaatttcagttcagaacaaatgagcggaagcttt
caatcttggaaacatagaaagcaccaaaaacaatgcagtaacagtaaccctgtagaagac
tctgggatgcatagagttgatttacaaggacagactatgtctagacctattctttgtgaa
gattcattgaccatgaatgagaagaatatgcaatttagaaacccagggccatttggcaaa
aatgtgtctttttgtgctgcagaaaaatacagcaaaacatcatgcctattaaaaacagag
caaagttgtttaaagaagaggacattagttaacgatactcaaacaacaattaatgatatt
cttgtaaaacatttttgcacaggatcactaagtaaaaatgtgacttatcaaactactagt
gtggctagtaaaaatgaaaaaggatcatctatagttgaaacagaaaaaataagtgaagtg
ctgatacagaatgattcaacaaaacaaaatgtttctgtgaaataccatgagacccaccca
attagccaatgcctagaaaagcaatgtaataaacagacaaacacttacatcaaacagaag
aatatagtagagaggcaaatgtcctgtgaagcagtcagtagttacatacataaagactca
agtgttactagggtcaaatgtggaagtctgaagcttaataaagaaaataatccaaatcat
tttcaagcattagaagttgagataagcagaactgagtcaactggagcattcagtaaatca
agaggccagcataaggactttctaaattcttctagaatacaagaaaaaacagataattat
ataacaaacaatattggaaataatcacgtttctgacttaggtttagttctctgtgatttt
gaagatagtttctacctggatacacagtcagagaaaataattcaacagatgacagatgaa
aattccaaacaaagaacaaaaggtaccaatctggtagcagggataatgcatagtagctca
gacaaacagaactgcatgaacaattttcagaacaagtatcactttacttcaccctgtgaa
caccattcctcagtagtgactaacccagaccatttgaaccttaagactgtagatactatg
acacaaagcgctgaacatggagttgacagactgactcccaaaagcctaatttttcattct
ccaatactgttgggggaaaatgacccttgctttaaagggaatgaactttctgttactgac
tcccagttgaacagttttcttcaaggttatcaaacacaagaaactgtgaaatcagtcata
cctctgacttctcaaaagagaactcccactggtgtagagagggaatatctgccagatcct
gaaaaaagtttgaatatgagtgatagtttattatttgacagttacagtgaagacttccta
gtaaaagaacaatcacccaatgtacaaaccaaagaacctcttccttctaaaataacatca
aaccatgtcagtgattcactgcatctacaagaagacactattaaaaatggaaatatgaat
gaacatcaaggtattcagcagttgacttgttgcaatgatgaatctgttattttttcagaa
atcgagtctgttcagttggttgaagctttggacaatgtagctatatttcctgttccagag
aaacctagcactgcattatctcttagagcattagaactaagtgattcagcagttatagct
aatagttatccccaaggagaagtaattggaagagatcgagatgaagggactcaaaaatcc
aaattaattgggacaaggcataataattcacttatatggtcaggagcatcatttgtttta
agtccagggctacaaaggattttagataaagtgtcccgtcctctggaaaatgaaaacgca
atcactgtaaacttgtcttgtttgaaagaaaaaaatacagagttaaatgagagacaggaa
gtgatttcaaatttggagacataccaagtacagggaatttcatttttccctaataatgaa
ataaaaagcaagattcttggaacacgagagaacaaccccagtcaaggtgaaacctcgtcc
tccttgcctagtaaagaaagttctataggtgatgataatggtcttattcctcctacaccc
agtccaacattttctaagctggcatttccagagattcttggaacatctgttaaacttcag
aaaagtagcagtgttttacagcctggtgaaatctatttattcagctcaccttcagatatt
aaaaaacatgatttaagtccagagaccagaaacagtttcaaggatgacagtcctatgaga
gacacaagtttttcagtacagttgtcacaggatggattgcagttaactccagcctcgttc
aattcagaaagtttggccataattgatgtcgcaagtgaccaaactctctttcaaacattc
attaaggagtggcagtgcaaaaaacgattttccatctcattggcttgtgaaaagatcaga
agtttgacatcttctaaaatcgccactattggtggtaggtttaagcaagttagcttactt
caggaaacccttattagagatgatggatttcctgttcaaggctctgatgacatcttggtg
gttggactggcagtatgctggggtggaagagatgcctattatttttcattacagaaggaa
caaacacattctgaaatcagtgccagtttggccccaccttctctggatccaaacctgact
gtgaaagagaggctgcgataccttcagtcctgcttgcaaaaggaatctgataaagaacgt
tctgttatcatctatgacttcatccagagttataaaattcttcttctgtcttgtggcatc
tccctggaacaaagttatgaagaccctaaggtggcatgctggttactcaatccagattct
aaggagccaactcttcatagcatagttaccagttttcttcctcatgaactcccgctccta
gaaggaatagagacaggccaaggaattcgaagtctggggctaaatgccagcattgagtac
tctgggcggtacagagcatctatagagtccattctcaccttcaactccatgaatgaactc
aactccttgttgcagaaggaaaaccttcatgatgttttccataaagtggaaatgccctct
cagtactgcttggctttgctagaactaaatggaattggctttagtactgcagaatgtgaa
agtcagaaacacatcatgcaagcaaaactggatgcaattgaggctcaggcctatcaacta
gctggtcacagtttttccttcaccagtgcagatgacatcgcagaggttttatttttggaa
ctgaagttgccaccaaatggagaaatgaaaatccaaggcagcaagaaaacactgggttct
accagaagagggaatgacagtggacgcaagctgaggctggggaggcagttcagcactagt
aaggatgttttaaagaaattaaaggaattacatcctttaccaggcttgatattggaatgg
agaagaatcagtaatgctattaccaaagtggtcttccccttgcagcgggaaaagcgtctg
aatcctttccttggaatggaaagaatctacccagtatcacaatcacacacggctacagga
cgcataacctttatagaaccaaatatccagaatgtgccaagagattttgagattaaaatg
ccaacattagtaggggagagcccaccttcccaagccctaggcaaaggcctgcttcccatg
gtcagaggacacagtaagaagagttgtggactgcatcctgggtaccaggcactgatgggg
gagaaggcctcagacagaggggtgccattttcagtgagcatgcgacatgcctttgtgcct
ttcccaggtggcttaatattggctgctgattactctcagcttgaactgaggatcttggct
catttgtctcatgatcgccgtctcatccatgtgttaaacactggagctgatgtgttcagg
agcattgcggcagagtggaagatgatagagcctgagtccgttggggatgatctgaggcaa
caagcaaagcagatttgctatggaattatttatggaattggagctaaatctctaggagag
cagatgggcgttaaagaaaatgatgcggcttgctatattgactccttcaagtctagatat
acagggattaagaatttcatgagagaaacagtgaagaattgtaaaagagatggctttgtt
cagaccattttgggaaggcgtagatatttgccaggaatcaaagacaacaacccttatcat
aaagctcacgctgaacgtcaggccatcaacacaacagtccaaggatcagcagcagatata
gtcaaggtagccacagttaacattcagaagcaattagagaccttccactcaaccttcaag
tcccacggtcattgggagggtatgctccgaaatgacagaacagaattattgcccaaaaga
agactgcaagggatgttctgcccaaccagaggaggcttcttcatccttcaactccatgat
gagcttttatatgaagtggcagaagaggatgttgttcaggtagctcagattgtcaagaat
gaaatggaaagtgccataaaactttctgtgaaactttctgtgaaagtgaaaataggagcc
agctggggagaactgaaggactttgatgtataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (49)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (67)   

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