KEGG   Cynara cardunculus var. scolymus (artichoke): 112521624
Entry
112521624         CDS       T05604                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112521624
Enzymes [BR:ccav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     112521624
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    112521624
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 Helicase_dom4_arc Myf5
Other DBs
NCBI-GeneID: 112521624
NCBI-ProteinID: XP_024986361
Position
LG 11:complement(13364787..13380475)
AA seq 2105 aa
MASGGSSRSRVDQFFSSKKKNKLVSLLSKSGIVEQDAKLALEASPSAKGSLSSYLVSSQN
ENHPLSTLLTARGSSDRQDQVRRNLTSEIESSSRNENVEIISSDQGHVHRSQGEKPNPCN
LVEPIAGDLQCNSSDSMLGVENPELQQFAANFLSFYCSELPTTKVNTNKRQGSPSVLDLD
GNLVKKRHLSSVGYQSHEGEAVVYIENPSDQVRIDNSKETSMGNNPELQLGLRKCNKTST
EAVDQILCDTPGIASDKVGTEKTPQSMHGSSMFSPGDTFWKEAIQVVDGMAYRNKDLPAQ
VVEESKGAKRDFRGGVDASMTSTGKNGISMEKEVSPLPVKHFDFSFEDKNKDVDSPCHRI
VNNMDRLVECPITGDNPTTMHMSTPCNQVQPLSNLQETSSSCVITKRRVDVLNQPNDNRT
SNTPGTDIKGSNMNCPHSVESTPSSSLLPNDRLDISNWLPSELCNIYKRRGISKLYPWQV
DCLQVEGVLQRRNLVYCASTSAGKSFVAEILMLRRVLSTRKMALLVLPYVSICAEKAEHL
EALLEPLDKHVRSYYGSQGGGTLPKDTSVAVCTIEKANSLLNRLLEEGRLQEVGIIVIDE
LHMVGDQHRGYLLELMLTKLRYGAGEGGVEFSSGESSGTSSGKTDPTQGLQIVGMSATLP
NVGAVADWLQASLYQTDFRPVPLVEYIKVGNAIYDKNMELVRTISKRADLGGKDPDHVVE
LCNEVVQEGHSVLIFCSSRKGCESTARHVAKYLTKFSVNTLNGESEYPDIASAVDALQKS
PAGLDPILAETLSSGVAYHHAGLTVEEREIVENCYRKGLVRVLTATSTLAAGVNLPARRV
IFRQPRIGRDFIDGTRYRQMSGRAGRTGIDTRGESVLICKPEEVKRIVALVGDSCPPLHS
CLSEDKNGMTHAILEVVAGGIVQTASDIHRYVRCTLLNSTQPFEDVVKSAKDSLKWLCHR
KFLEWTEDTKLYSTTSLGRASFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLVTPT
NVDVEPDWELYYERFMQLSALDQSVGNRVGVQEPFLMRMAHGAPIRTSERSRHVIKGLGV
STNGILTDDQMLRVCKRFYVALILSRLVQEVPVAEVCEAFKVARGMVQSLQENAGRFASM
VSVFCERLGWHDLESLVAKFQNRVSFGVRAEIVELTTIPYIKGSRARALYKAGLRTPQAI
AEASVYEIAKAIFESSSWDAQENSAQKRIQLGVAKKIMNGARKVVLDKAEEARAAAFSAF
KALGVDVPQFSLPKLPLASVNFTKKEAVTSSREETTSCFVCVDQGIQISTKSLIEGSDYQ
NNKKSKSEGATEEKPCDVGVGTSAEENSDDTTLSYSGAVNLVATVNGSRAIAYERKSTSD
HINDMKEKTSDQHLPQKEHERKDVCVGSKERNPEKGPMNAVNAPGGFDSFLDMWEATQEF
FFDIHFTKRSEFNSIAPFEVHGIAICWVDSPVYYISVPKDLFSERNKNLIGNSLRAPEDQ
LEMAKQRWCRVGMIMGKSQVRKFGWNLKIQNQVLKNPAVPIQRFGSMFRPVKTIGVELIE
SSYYMFSPVHLKDAIDLCVVAWILWPDEERSSNPNLEKEVKKRLSSEVAAAANQNGRWKN
QMRRAAHNGCCRRVAQTRALSCVLWKLLASEKLHEPLVTIEMPLVNVLADMELYGIGVDM
EGCIQSRHLLGKKLRYLEKEAYKLAGTRFSLYTAADIADVLYTRLKLPIPDGYKGKQHPS
TDKHCLDLLRLEHPIISVIKEHRTLAKLLNCTLGSICSLSKLSMRTQRYTLHGHWLQTST
ATGRLSMEDPNLQCVEHMVEFEINHDENEDGDSDTDHCKVNPRDFFVPTQENWLLVTADY
SQIELRLMAHFSKDSSLVDLLTKPLGDVFNLITAKWTGKSESSVDPKERDQTKRLVYGIL
YGMGANSLAEQLECSPDDAGDKIQSFKRSFPGLASWLKEAVTVCRKKGYVETLMGRKRFL
AKINFGNNEEKSKAQRQAVNSICQGSAADIIKVAMITIHSVIADGVEKSESSIQFAERFH
MLKGRCRILLQVHDELILEAEPSFVNEAGLLLKLSMESAASLLVPLIVKLKCGRTWGSLE
PLLPG
NT seq 6318 nt   +upstreamnt  +downstreamnt
atggcgtcaggtggttcctcacgctcccgtgttgatcagttcttttcttcaaagaagaag
aataagcttgtatcactcctttcaaagtcggggattgttgaacaagatgcaaagcttgcc
cttgaagcatctcctagtgccaagggttctttgtccagctatttagtgtcttcacaaaat
gaaaatcatcctcttagtactttactcacagctcgtgggtcatctgataggcaagatcaa
gtgagaagaaacttgacatcggagattgagtcgtcttcaagaaatgaaaatgtcgaaatt
atatcatctgaccaagggcatgttcatagatcacaaggggagaaaccgaatccgtgtaat
ttggtagaacctatagctggagaccttcaatgtaactcttctgattccatgcttggcgtg
gaaaatcctgaactacaacagtttgcggctaattttttgtcattttattgtagtgaactt
ccaactacaaaagttaacacaaataaaaggcagggtagtccatctgttctagatttggat
ggaaatttggttaagaagaggcatttaagtagtgttggataccagtcccatgagggtgaa
gcagttgtctatatcgagaatccatccgatcaagtgcggattgacaactccaaagagact
agtatgggtaacaatccagagcttcaattaggcttgagaaaatgcaataaaacatccacg
gaagctgttgatcagatattatgcgatacaccggggatcgcctcagataaagttggaact
gaaaaaactcctcagtcaatgcatggaagctccatgttttcaccaggagatacattctgg
aaagaggcgatccaggtggtcgatggtatggcgtaccgcaataaagatcttcccgcacag
gttgttgaagaatccaaaggtgccaagagagatttcagaggtggagtggatgcttccatg
acatctacagggaagaatggtatttctatggaaaaagaagtgtcccctttacctgtgaag
cattttgatttttctttcgaggacaaaaataaggacgtggattctccatgccatcgcatt
gtaaataatatggacaggcttgttgagtgtcctataaccggtgacaatccaacaaccatg
catatgagcaccccttgcaaccaagtccaacctttgtctaatttgcaagagacatcttcg
agttgtgtaattaccaaaaggagagtggatgtattgaatcaacctaatgataatagaaca
tctaatacaccaggtacggacatcaaaggttctaacatgaattgtcctcacagtgtagaa
agtactccatcaagttccttgcttcccaatgaccgtttagacattagcaattggctccct
tctgagctatgcaacatttataaaagacggggaatatcaaagctgtatccttggcaggtg
gattgccttcaggtagaaggggtgttacaaagaaggaaccttgtgtattgtgcatctaca
agtgctgggaaaagttttgttgcagaaattttgatgttgcgtcgagtattatcaacaaga
aaaatggcacttcttgttcttccctatgtatcaatttgtgcggagaaggctgaacatctt
gaagccctactggaaccacttgacaagcatgttcgcagttattatggaagccaaggtggt
ggaacgcttcctaaagatacctctgtagctgtttgcacaatcgagaaggcaaactctcta
ctcaatagattgctagaagaggggcgtttgcaagaagttgggatcatagtaattgacgaa
cttcacatggttggagatcagcacaggggctatctcttggaacttatgttaacaaagctt
cggtatggagctggagaaggcggtgtagaattttctagcggagaaagttctgggactagc
agtgggaaaaccgaccccactcagggtctccaaattgttgggatgagtgcaaccttgccc
aatgttggtgcagttgctgattggcttcaagcatcactttaccagacagattttcgacct
gttccgcttgtggagtacattaaagttggtaacgcaatttatgacaaaaatatggaactt
gttaggacgatctcaaaaagagctgatcttggtggtaaagatcctgaccatgttgtagaa
ttatgcaatgaggttgtccaagagggccattcagtgttgattttttgctccagtcgtaaa
ggatgtgaatcaactgccaggcatgttgcaaagtacctcacaaagttctctgtaaatacc
cttaatggtgaaagtgaatatcctgatattgcttctgccgttgatgcattgcaaaagtct
cctgcaggattagatcctatattagccgaaacactttcttcaggtgttgcctatcatcat
gctggtcttacggttgaagaaagagaaattgttgaaaactgctatcgtaaaggtctagta
cgtgtcttaactgctacatccaccttagctgctggggtcaatctacctgcaaggagagtt
atcttccgacagcctcggattggtcgtgattttatagatgggacaagatatagacagatg
tctgggcgtgctggtcgcacaggaattgacacaagaggagagagtgtgctaatatgcaag
cctgaagaagtgaaaagaattgtggcgctcgttggtgatagctgcccaccattgcattcc
tgtttgtccgaagataagaatggaatgacccatgcaatcttagaagttgttgctggtggt
attgttcaaactgctagtgatattcatcgatatgttaggtgcactcttctcaattcaaca
caaccatttgaagatgtagttaaatcagcaaaagattccctgaagtggctgtgccatagg
aagtttcttgagtggaccgaagatactaagttatatagtaccacatctcttggacgtgct
tcttttggcagctctctctgtcctgaggagtcacttattgtgttggatgacctttcacgg
gcgagagaaggatttgtgcttgcatcggacttgcacttagtatacttagtaacaccaact
aatgttgatgttgagccagattgggaattgtactatgaaagattcatgcaactgtccgct
cttgatcagtctgttggaaatcgtgttggagtgcaagaaccgtttttgatgcgtatggct
catggagctccaattcgcacttcagaacgatcaagacatgtgataaaaggacttggggtg
tcaactaatggcatccttacagatgatcaaatgcttcgtgtctgtaagagattctatgtt
gcactcatcttatcaagacttgtacaggaagtacctgtggcagaggtttgtgaagctttc
aaggtggctcgtggaatggttcaatctttgcaagaaaatgccggaaggtttgcttctatg
gtttcagtgttttgtgaaagacttggttggcatgatcttgagagcttggttgccaagttt
caaaatcgtgtttcatttggtgttagagcagagattgttgagcttaccaccattccatat
atcaagggttctcgagctagggccctttataaagctggcttgcgcactccccaagcaatt
gctgaagcatctgtatatgaaattgctaaagccatttttgaatcttcatcgtgggatgca
caagagaactcggcacaaaagcgtattcagttgggagtggccaaaaagataatgaatggt
gcccgcaaagttgtcctggataaagctgaagaagcaagggctgctgctttctcagctttc
aaggctcttggggttgatgttcctcagttttctctacccaaattaccattagcttctgtg
aatttcacgaagaaagaagcagtaacgtcttcacgagaagagaccaccagctgctttgtt
tgcgtggaccaaggaatacaaatttcaacgaagtctctaatagaaggaagtgattaccaa
aataataaaaaatcaaaaagtgaaggagcaacggaagaaaaaccatgtgatgttggtgta
gggacctcggcagaagaaaactccgatgatacaactttaagttactcgggtgctgtcaac
ctggtggccacagttaatgggtcccgagccattgcttatgaacgaaaatctacctctgat
cacatcaacgatatgaaggaaaagacttccgatcaacatcttccccagaaagagcatgag
aggaaagatgtatgtgtcggtagcaaggaaagaaaccctgaaaagggtccaatgaacgca
gttaatgctcctggtggatttgattctttcttggatatgtgggaagccacacaagaattc
tttttcgatattcacttcaccaaacggtctgaattcaactcaattgctccttttgaagta
catggcattgcaatctgctgggtagattctcctgtttactatatcagtgttcccaaggac
ttattcagtgaaagaaacaaaaacctaattggtaatagtcttcgggctccggaggatcag
cttgagatggcaaagcagagatggtgtagagttggtatgataatggggaaaagccaagtc
cgaaaatttggatggaatttgaagattcagaatcaggtgttaaagaatcccgctgttcct
attcagaggtttggtagcatgtttcgtccagtgaaaactatcggtgtggagctcattgaa
agcagttactacatgttttctccagttcatctgaaagatgctattgacttgtgtgttgta
gcttggattctgtggcctgatgaggagagaagttctaatccgaatttggaaaaggaagtc
aaaaagaggttatctagtgaggtggcagcagctgcaaaccagaatggtcgctggaaaaat
cagatgagaagagcggcacataatggttgctgccgccgagttgctcaaacacgagccttg
tcatgtgttctctggaagttgctagcatctgagaaacttcatgaacctctagtaactatc
gagatgccactggtaaatgttcttgcagatatggaactttatggaattggtgttgatatg
gagggatgcattcaatcacgtcatctgttgggtaaaaaactgagatatctggagaaggaa
gcttataagttggccggtacgagattttctttatatacagcagcagatattgcagatgta
ctatatacacggttaaagctaccaattccggatggttacaaagggaaacagcaccctagt
actgacaagcattgtttagatttgttaaggcttgagcatcccatcatttctgttattaaa
gagcatcggacgttggccaagctcttgaattgtacattgggctcaatatgttcactttct
aagttatccatgaggactcaaagatatacactgcatggacattggctccaaacttcaaca
gcaacaggacggttatccatggaggaccccaatcttcagtgtgtcgagcatatggttgaa
ttcgagataaatcatgatgaaaatgaggatggtgattcagacacggatcactgcaaagta
aatcctcgggatttcttcgttcctactcaggaaaactggttactggtaactgcagattat
tctcagatagaattgaggctgatggcccatttctctaaagactcgtcactagttgatctc
ctcactaaacctcttggtgatgtttttaatttgattactgcaaagtggacagggaaatca
gagtcctcagtggaccctaaagagcgagatcaaaccaaaagactggtctatggtattcta
tacggtatgggtgcaaattcccttgctgaacaactggaatgcagtcccgatgatgctgga
gacaaaatccagagcttcaaaaggtcttttcctggccttgcttcatggcttaaagaagca
gttacagtttgccgtaaaaaaggttatgtggaaaccttgatggggcggaagcggtttttg
gcaaaaattaattttgggaacaatgaagaaaaatcaaaagctcagagacaagctgtgaat
tccatttgtcagggatctgcagctgacataatcaaagttgcaatgataactatacactct
gtcatcgctgatggtgttgagaagtctgagtctagcatccaatttgcagaaagattccac
atgcttaagggtcgctgtagaatccttctacaggtacatgatgaattaatacttgaagct
gaaccttcatttgtgaatgaagctggattgctgctaaaattgagcatggaaagcgctgcc
tcccttcttgttccattgatcgtcaaactgaagtgtggaagaacatggggatctttagaa
ccactactgcctggttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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