KEGG   Campylobacter coli CVM N29710: G157_03415
Entry
G157_03415        CDS       T02838                                 
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ccc  Campylobacter coli CVM N29710
Pathway
ccc03420  Nucleotide excision repair
ccc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G157_03415
   03430 Mismatch repair
    G157_03415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccc03400]
    G157_03415
Enzymes [BR:ccc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     G157_03415
DNA repair and recombination proteins [BR:ccc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G157_03415
   MMR (mismatch excision repair)
    Other MMR factors
     G157_03415
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 PcrA_UvrD_tudor AAA_30 NopRA1 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: AGV09797
Position
complement(684121..686181)
AA seq 686 aa
MNLFTGLNESQKEAASHIDGPMLILAGAGSGKTKTITTRLAYMIGEVGIPAINTLTLTFT
NKAASVMKNRALSLLNSSENPLLCTFHKFGLLFLKLHIERLGRKNNFIIIDNDDSKKILK
ELINDDKTSPHQILQFISHFKNESKSVQDVFNDLELLKDNEIKHQALQKIAIYYQNYQEY
LLKHNFVDFDDLLLLTNILLENDQNFAKEQSSFYRYITVDEYQDTNALQYKILKNLCCVH
ENICVVGDDDQSIYSWRGAKIENILNFQSEFSNVKLVKLEQNYRSVGMILKAANNLISHN
KKRLGKTLLCTKDEGEDIQILSSDNEKIESALVAKKIKELLNSGIYAGEIAVLFRINALS
RSIEEAFMKEKIPYKLLSGMRFYERLEIKDLICYFRILINPNDDLSFKRIINRPKRSIGE
KALQNLEDYAQKRKISLFEALCESDGSVGIFSLKKAQNEAKKFIQNIYKLREYSDLKKMI
EKFEELFALKEFYALQEDGDERVLNIDEFYASIKEKIKEEPQTTLEDILSEISLLSDQDG
IEGECVYLMSVHASKGLEFDHVFIVGLEEGFFPLNESDIEEERRLAYVAITRAKKCLSLS
IAKSRFYRGSRTELDSSRFLEESQLTKKISINKTEQGYHKGDLVKHKIFGIGRVISVNKS
AKEEKLTINFGGIERIIMASFVEKAV
NT seq 2061 nt   +upstreamnt  +downstreamnt
atgaatttatttacaggtttaaacgaaagtcaaaaagaggctgcaagtcatatcgatggc
cctatgcttatactagcaggtgcgggtagtggaaaaaccaaaacaattacaacgcgtctt
gcctatatgattggggaagttggaattcctgctatcaataccctaaccctaacctttaca
aacaaggctgcaagtgtgatgaaaaatagagccttaagccttcttaatagcagtgaaaat
cctttactttgcacttttcataaatttggcttattgtttttaaaactccatatagaaaga
ttaggaagaaaaaataattttattatcatcgataatgatgattctaaaaaaattttaaaa
gaactcattaatgatgataaaactagccctcatcaaattcttcagtttatctcgcacttt
aaaaatgaaagtaaaagtgttcaagatgtatttaatgatctagaattgttaaaagataat
gaaatcaaacaccaagccttgcaaaaaattgctatttattatcaaaactatcaagaatat
ttactcaagcacaatttcgtagattttgatgatcttttacttttgaccaatattcttttg
gaaaatgatcaaaatttcgccaaagagcaaagctctttttatcgttatatcacagtcgat
gaatatcaagataccaatgctttacaatacaaaattcttaaaaatctttgctgcgttcat
gaaaatatatgcgttgtaggggatgatgatcaaagcatttatagttggcgtggtgcaaag
atagaaaatattttaaatttccaaagtgaattttcaaatgtaaaacttgttaaattagag
caaaattatcgttctgtgggtatgattttaaaagctgctaataacctaatatcacacaat
aaaaaacgtcttggaaaaaccctactttgcacaaaagatgagggtgaagatattcaaatt
ctaagttcagataatgaaaaaatcgaaagtgcattggtggctaaaaaaatcaaagagctt
ttaaattcgggcatttatgctggagaaattgctgttttatttcgtatcaatgctctttca
agatccatagaggaagcctttatgaaggaaaaaattccttataaattgctaagcggaatg
cgtttttatgaaagacttgaaatcaaagatctcatttgctattttagaattttaatcaac
cctaatgatgatttatcctttaaacgcattatcaataggcctaaaagaagcataggtgaa
aaagctttacaaaatttagaagattatgcacaaaaaagaaaaatttcactctttgaagca
ttgtgcgaaagcgatggcagtgtgggaattttttctcttaaaaaagcacaaaatgaggca
aaaaaattcatacaaaatatttacaaacttagagaatattctgatttaaaaaaaatgatt
gaaaaatttgaagaactttttgctcttaaagaattttacgctcttcaagaggatggcgat
gagcgcgtattaaatattgatgaattttatgcaagcatcaaagaaaaaataaaagaagaa
ccacaaacaaccctagaagatattttaagtgaaatttcactgttaagcgatcaagatggg
attgagggagaatgtgtatatcttatgagtgtgcatgcgagcaagggtttggaatttgat
catgtatttatagtaggacttgaagaaggattttttcctttgaatgaaagcgatatagaa
gaagaaagacgccttgcttatgtggctatcactcgcgctaaaaaatgtctatcgctaagc
attgcaaaatctcgtttttaccgaggaagtcgcacggaattagactctagtcgtttttta
gaagaaagtcaattaacaaaaaaaatctctataaacaaaaccgaacaaggatatcataaa
ggagatctagtcaaacataaaatttttggcataggacgcgttattagtgtcaataaaagc
gcaaaagaagaaaaacttaccataaattttggcgggatagaacgcattattatggcaagt
tttgtggaaaaagccgtatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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