KEGG   Clostridium carboxidivorans: Ccar_07235
Entry
Ccar_07235        CDS       T03979                                 
Name
(GenBank) ATPase AAA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cck  Clostridium carboxidivorans
Pathway
cck03420  Nucleotide excision repair
cck03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ccar_07235
   03430 Mismatch repair
    Ccar_07235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cck03400]
    Ccar_07235
Enzymes [BR:cck01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Ccar_07235
DNA repair and recombination proteins [BR:cck03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Ccar_07235
   MMR (mismatch excision repair)
    Other MMR factors
     Ccar_07235
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 DEAD SLFN-g3_helicase AAA_11 ResIII PhoH Zeta_toxin NACHT
Other DBs
NCBI-ProteinID: AKN30633
UniProt: C6PVR3
Position
1674578..1676866
AA seq 762 aa
MALNDEDIILEKNNLSEMEDWIHNEEIKIKENDDELKKRIDGLRKQSKGKYNEELETKEK
LYKITHKNLEKYNEAKSQPYFGRIDFREYKRDNEIFYIGKFGLMDMTTGDEKVIDWRSPI
ADLYYSGTYGEVFYRAPMGIVSGELTLKRKFLIKEGKLINAFDEGINEIILRSAGGGENV
LMDEYLKINLEQSVSNKLKDVVATIQKEQNDIIRAEKNTALIVQGSAGSGKTTVALHRLA
YLIYKYNGKLKGEDILVVAPNKLFLDYISEVLPDLGINTVKQITFEEIALEVLKLKGKLI
TKDKKLSDILEAKDSENLKYMTKSSNIKGTMEYKLLMDKYIEYVELKDLDIEDIKVEKYL
LFDKKEIKRLYSKDMVNLSLNNRKDEIKRYFTLKIDEKIRNVLDKIDFSYEYMIARVKKT
MEDGPLRRKKLIELYDARDNKKVQIKQASIKNFEDYFDKWKITDTKRFYFDLFNEEEIFN
EVIKDKIPKKLALYVKKELSYNFENDIFDSDDLAAMMYLKFKIEGVPEKYKYKHIVIDEA
QDYSMFQIAVLNEMVLNNSLTIVGDIGQGIYYYKGIERWESLVDDVFRNKATYIQLTQSY
RSTVEIIEFANKVLKKQKNKLKPAMPVLRHGKCPEIIEFNNNREFAEKLDSIVEEVKAMD
KKSIAVIGRTYEECKKIKEHLKKYSNYKWELVKETDKNLKLEKIIVPSYMTKGLEFDCSV
IYNCNKDNYKDNELDKKILYVCLTRALHLQYIFYNKCISELI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggctttaaatgatgaagatattatattggaaaaaaataatttaagtgaaatggaagat
tggatacataatgaagaaataaaaattaaagaaaatgatgatgaattaaaaaagaggata
gatggtcttagaaaacaatctaaaggtaaatataatgaagaattagaaacaaaggaaaag
ttatataaaataacccataaaaatttagaaaaatataatgaagctaaaagtcaaccatac
tttggaagaatagattttagagaatataaaagggataatgagattttttatataggaaaa
tttggacttatggatatgacaactggtgatgaaaaagttatagattggagatcgccaata
gctgatttatattatagtggaacctatggagaagttttttatagagcacctatgggaata
gttagtggcgaattaactcttaaaagaaagtttttaattaaagaaggtaaacttataaat
gcttttgatgaaggcataaatgaaataattttaagatcagcaggtggtggagaaaatgtt
ctaatggatgaatatttaaaaatcaatttagagcaaagtgtaagtaataaattaaaggat
gttgttgccaccatacaaaaagagcaaaatgatataataagagctgaaaagaatacagca
cttatagttcaaggttcagctgggtcaggaaagactacagtagcacttcatagattagct
tatttaatatataaatataatggaaaacttaaaggagaagatattttagttgtagctcct
aataagttatttttagattatatatcagaagttttacctgaccttggaataaatactgtt
aaacagattacttttgaagaaatagctcttgaagtattaaagcttaaaggaaaactaatt
acaaaggataaaaagctttcagatatattagaagcaaaagatagtgaaaacttaaagtat
atgactaaaagcagcaacattaaaggtacaatggaatataagctacttatggataaatat
atagagtatgtagagttaaaagatttagatatagaggatataaaggttgaaaagtacttg
cttttcgataaaaaagagataaaaagattatattctaaagatatggtaaatttatcttta
aataatagaaaagatgaaattaaaagatattttacattaaaaatagatgaaaagataaga
aatgtactagataaaatagatttttcttatgaatatatgatagcaagagtaaaaaaaacc
atggaagatggtcctttaagaagaaagaaactaatagaattatatgatgcaagagataat
aagaaggtgcaaataaagcaagcaagcatcaaaaattttgaagattattttgataagtgg
aaaataacagatactaaaagattttattttgacttatttaatgaagaggaaatttttaat
gaagttattaaggataaaatacctaaaaaacttgctttgtatgtgaaaaaggaattaagt
tacaattttgaaaatgacatttttgatagtgatgatttagcagctatgatgtatttaaaa
ttcaaaatagaaggcgtgccagaaaaatataaatataaacatatagttatagatgaagca
caggattatagtatgtttcaaatagctgtactaaacgaaatggttttaaataattcttta
actatagtaggagatataggacagggaatatattattataagggtatagagagatgggaa
agcttagtagatgatgtatttagaaataaagctacttatatacagctcactcaaagttac
cgttctacagtggaaataatagaatttgcaaataaagtgcttaagaaacaaaaaaataag
ttaaaacctgctatgcctgttttaaggcatggtaaatgtccggaaattattgagtttaat
aataatagagagtttgcagaaaaattagactctatagtagaagaagtaaaagctatggat
aaaaagagtatagcagttataggaagaacttacgaagaatgcaaaaagataaaagagcat
ttaaaaaaatacagcaattataaatgggagcttgttaaagaaacagataaaaatttaaaa
ttggagaaaataatagtaccttcctatatgacaaaaggattagagtttgattgtagtgtt
atatataattgtaataaggataactataaagataacgaattagataagaaaatattatat
gtttgtctcactagagcactgcatttacagtatattttttacaataaatgtatatctgaa
cttatttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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