KEGG   Clostridium cochlearium: SAMEA4530647_2188
Entry
SAMEA4530647_2188 CDS       T06756                                 
Symbol
ntcA_3
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ccoh  Clostridium cochlearium
Pathway
ccoh02020  Two-component system
ccoh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SAMEA4530647_2188 (ntcA_3)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAMEA4530647_2188 (ntcA_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccoh03000]
    SAMEA4530647_2188 (ntcA_3)
Transcription factors [BR:ccoh03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    SAMEA4530647_2188 (ntcA_3)
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp MarR_2 Peptidase_M15_2 HTH_3 HTH_24 HTH_11 HTH_29 MarR DUF746
Other DBs
NCBI-ProteinID: SNV88366
Position
1:complement(2165118..2165819)
AA seq 233 aa
MVGLPYDFMISIIKNISIFNSLTEEEVSTLSKSSKIIKLKKGEILFSEKDLVNNIYIVYS
GKVTVFRLSEMGAKRVIYILDKGEIVNEVIFDKLPASVSCEMFEDSQILSLSSNDMLKVM
ESNFTFNKGVIDSMGRKIRRLYRQLKNTVPIKMDKKLAAKLWKLSKDYGVKVNRGVLINL
DITVTYLADMLGSSRETISRCISDFQKSNLIEFKDKKIIVKNRESLSRYFKGM
NT seq 702 nt   +upstreamnt  +downstreamnt
atggtagggttaccatatgattttatgataagtataataaaaaatatatcaatttttaat
tctcttactgaagaagaagtgtctacattatctaaatcatctaaaataattaaattaaaa
aaaggagaaattttatttagcgaaaaagatttagttaataatatatatatagtttatagc
ggaaaggtaactgtttttagattatctgaaatgggagctaaaagggtaatttatatttta
gacaagggtgaaatagtaaacgaagtaatatttgataaattgcctgcatcggtaagttgt
gaaatgtttgaagatagccaaatattgtctttaagtagtaatgatatgttgaaggttatg
gaaagcaattttacatttaacaagggtgtaatagattctatgggtagaaaaataagaagg
ttgtatagacagttaaaaaatactgtacctataaaaatggataaaaaactagcagctaaa
ctgtggaagttaagtaaggattatggtgtaaaagtaaatagaggagtactaataaatttg
gatattactgtaacttatcttgcagatatgcttggtagtagcagagagaccatttcaaga
tgcataagtgattttcaaaaaagtaatttaatagagtttaaagacaaaaagataatagtt
aagaatagagaaagcctttctaggtattttaaagggatgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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