KEGG   Cronobacter condimenti: AFK62_01255
Entry
AFK62_01255       CDS       T04060                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
ccon  Cronobacter condimenti
Pathway
ccon03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AFK62_01255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccon03019]
    AFK62_01255
Enzymes [BR:ccon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     AFK62_01255
Messenger RNA biogenesis [BR:ccon03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AFK62_01255
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: ALB61225
Position
complement(272173..273438)
AA seq 421 aa
MSKTHLTEQKFSDFALHPVVVQALEKKGFHNCTPIQALALPLTLTGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAAESRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHTIPVSKYNPDALLNELPPPKRLSRPRTGNGPRRSGAPRNRRRT
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacacttgactgaacagaagttttccgacttcgccctgcaccctgtcgta
gttcaagcccttgaaaaaaaagggtttcataactgcacacctatccaggctctggcactc
ccgttaacgctcacgggccgtgacgttgcagggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcactatttactctctcaccctgctgcggaaagtcgc
caggtgaatcagccgcgcgccctgattatggcgccgacccgcgaactggcggtgcagatt
cactccgacgcggagccgctggcggaagctaccggccttaagcttggtctcgcctacggc
ggcgacggctacgacaagcagttgaaagtgctggaaagcggcgtcgatatcctgatcggc
accactggccgtctcattgattacaccaaacaaaaccacgtcaatctgggcgcgattcag
gtcgtcgtactcgatgaagccgatcgcatgtacgacctgggcttcatcaaagatattcgc
tggctgttccgccgtatgccggctgccgcgcaacgtctcaatatgctcttctccgctacc
ctgtcttaccgtgtgcgtgaactggcgtttgaacagatgaacaacgcggagtatgtcgag
gttgagccggagcagaaaacgggccaccgtatcaaagaagagcttttctatccgtctaac
gaagaaaaaatgcgcctgctccagacgctcattgaagaagagtggccggaccgcgccatt
attttcgcgaataccaaacaccgctgtgaagacatctggggtcatctggccgcagacggt
catcgcgtaggtctgctgaccggcgacgtagcccagaaaaaacgcctgcgtattcttgat
gaatttacccgcggcgatctcgacattctggtggcaacggacgtagcggcacgcggcctg
catatcccggccgtgacgcacgtcttcaactacgatctgccggacgactgcgaagattat
gttcaccgtattggccgtaccggtcgcgcgggcgccagtggtcactctatcagccttgct
tgtgaagagtacgcgctgaacctgccggctattgagacgtatatcggccataccattccg
gtaagtaaatacaacccggatgcgctgttaaacgagctgccgccgccgaaacgcctgtcg
cgtccgcgtaccggcaatggcccgcgtcgctccggcgcgccgcgcaaccgtcgtcgtaca
ggataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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