KEGG   Clostridioides difficile 630: CD630_12300
Entry
CD630_12300       CDS       T00487                                 
Symbol
sigK
Name
(GenBank) Sigma K
  KO
K03091  RNA polymerase sigma-E/F/G factor
Organism
cdf  Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:cdf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cdf03021]
    CD630_12300 (sigK)
Transcription machinery [BR:cdf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CD630_12300 (sigK)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 HTH_3 Trp_repressor HTH_23 HTH_31 GerE HTH_24 HTH_28 Sigma70_r4_2 MarR_2 HTH_25 Sigma70_ECF HTH_38 MarR Asp_decarbox HTH_10 HTH_19 Phage_CI_repr
Other DBs
NCBI-ProteinID: CAJ68084
UniProt: X1W3M1
Position
complement(join(1429412..1429681,1444350..1444739))
AA seq 219 aa
MAALKSFEKPLTPEEEIEYLTKFKIENDKSAKDTLIERNMRLVAYIAKKYNNSTEDQDDL
ISIGTIGLIKAIETYNIDKGTRLATYASRCIENEILMNIRSNKKNKTQVSLQDPIGTDKE
GNEINTILYMSLLDILGTEANYVLDEVELKVQVGKLYEQLNKILTPREREIVQLRYGLTP
YGYKTQREIAQKLDISRSYVSRIEKKALKKLEKELVQES
NT seq 660 nt   +upstreamnt  +downstreamnt
ttggcagctcttaaatcttttgaaaaacccttaacccctgaagaagagattgagtattta
actaaatttaaaatagaaaacgataaaagtgcaaaagatacattaattgaaagaaacatg
agattagtagcttatatagcaaagaaatataataattcaacggaagatcaggatgattta
atatccataggtacaataggattaattaaagctatagaaacttataacatagataaagga
actcgattagcaacatatgcttctagatgtattgaaaatgagattttaatgaatattaga
tctaacaaaaaaaataaaactcaagtatctctacaagaccctatcggaacagataaagaa
ggtaatgaaataaacactattctttatatgagtcttttagatatacttggtacagaggct
aactatgttcttgatgaagttgaactaaaagttcaagttggaaaactttacgaacaacta
aacaaaattcttactcctagagaaagagaaattgtccagttaagatatgggttaactcct
tatggctataagacacaaagagaaattgcacaaaaactcgatatatcaaggtcatatgta
tctagaatcgaaaaaaaagctcttaaaaaactagaaaaagagcttgttcaagaaagttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system