KEGG   Cellvibrio sp. PSBB023: B0D95_18125
Entry
B0D95_18125       CDS       T04725                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
ceb  Cellvibrio sp. PSBB023
Pathway
ceb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ceb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B0D95_18125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ceb03400]
    B0D95_18125
DNA repair and recombination proteins [BR:ceb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B0D95_18125
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      B0D95_18125
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 AAA_23 RsgA_GTPase DnaJ_CXXCXGXG AAA_22 AAA_21 T2SSE AAA_24 AAA_33 nSTAND3 cobW MMR_HSR1 AAA_28 Viral_helicase1 AAA_25 Cytidylate_kin BCA_ABC_TP_C RNA12
Other DBs
NCBI-ProteinID: AQT61800
UniProt: A0A1U9NEQ0
Position
complement(4187594..4190443)
AA seq 949 aa
MDKIIVRGARTHNLKNIDLDIPRDKLVVITGPSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHVEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGEARC
PEHNVPLAAQTISEMVDTTLALPEGTKLMLLAPVIRDRKGEHLHVFEQLKRDGFIRARID
GILCDLDDTPKLDKKKKHTVEVVIDRFKVREDLKLRLSESFETALNLSEGIACISYMDGE
APDRLFSSKHACPICDYSLTELEPRLFSFNNPAGACPTCDGLGVHQFFDEDKVIQDTSLS
LSDGAIRGWDKRNVYYFHMLASLAKHYGFNVDTPWAKLKAKQREAVLYGSGDEVIEFNYI
NDRGDVYKRSHSFEGVLPNMERRYRDTESNSVREDLTKFLSSQPCPDCEGTRLRIEARNV
FIDERPLPRITEMPVADAYNYYMQLEFSGRKAGIADKILKELRDRFRFLVDVGLNYLTLN
RSAETLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLKTLTHLRDIGNTV
IVVEHDEDAIRLADHVIDIGPGAGVHGGQVIAQGNVKAIMANKESITGQYLSGTREIAIP
AKRHPFDAKNKLRLIGAKGNNLQNVTLEIPVGLMTCVTGVSGSGKSTLINATLHPLAATA
LNGATTLDPAAYDSIEGLELFDKCVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYQPGRFSFNVKGGRCEACQGDGVTKVEMHFLPDVYVPCDVCKGKRYNRETLDVKYK
GKNIHEVLEMTVEDSRAFFDAIPSIANKLQTLIDVGLSYIRLGQSATTLSGGEAQRVKLA
KELSKRDTGKTLYILDEPTTGLHFYDIQQLLNVLHRLRDHGNTVVVIEHNLDVIKTADWI
VDLGPEGGSGGGQIIATGTPEEIAQLEHSHTGRFLKPMLKVKKTKAAKK
NT seq 2850 nt   +upstreamnt  +downstreamnt
atggacaaaattattgtgaggggtgcccgcacccacaacctgaaaaatattgacctggat
atcccgcgcgacaaactcgtcgttattaccggcccctcgggctcgggcaaatcctcgctc
gcatttgacaccctctacgccgaaggccagcgccgctacgtggagtcgctatcgacctat
gcgcgccaattcctgtcgatgatggaaaagcccgacgtggatcatgtggagggtctgagt
ccggccatctccatcgagcaaaaatccacttcgcataaccctcgctccacagtgggaacc
atcactgaaatttacgactacctgcgcctgctctatgcccgcgtcggtgaagcgcgctgc
ccggagcacaatgtaccgctcgccgcgcaaactatcagtgaaatggtcgataccaccctc
gccctgcccgaaggcaccaagctcatgctgttggcgccggtaatccgcgaccgcaaaggc
gaacacctgcatgtgttcgagcaactcaagcgcgacggttttattcgcgcgcgtatcgac
ggcatattgtgcgacctggacgacacacccaagctcgacaagaaaaagaaacacacggtc
gaagtggttattgatcgttttaaagtacgtgaagacctgaaactgcgtctgtcagaatcc
tttgaaaccgcgctcaacctgtcagaaggtatcgcctgcatcagctatatggatggcgaa
gcaccggaccgcctgttttcctccaaacatgcctgcccgatttgcgattacagcctgacc
gaactggaaccacgcctgttctcgtttaataaccctgccggcgcctgccccacctgcgat
ggcttgggtgtgcaccaattctttgatgaagacaaagtgattcaggacaccagcctgagc
ctgtccgacggcgccatccgcggctgggataaacgcaatgtctactactttcacatgctg
gcatcgctcgccaaacactacggctttaacgtcgataccccctgggccaaactcaaagca
aaacagcgcgaagcggttctttacggctctggcgacgaggttatcgaattcaattacatc
aatgatcgcggcgatgtctacaaacgcagccacagctttgaaggcgtactgccaaatatg
gaacgccgctatcgcgataccgaatccaactcggtgcgtgaggacctgaccaaattcctc
tccagccagccctgtccggactgtgaaggcacgcgcctgcgcatagaagcgcgcaacgtc
tttatcgacgagcgcccactgcccagaatcaccgaaatgcccgttgccgatgcctacaat
tactatatgcagctggagtttagcggccgcaaagcaggcatcgccgacaagatcctcaaa
gaattgcgcgatcgtttccgcttcctggtcgatgtaggcctgaactacctcaccctcaac
cgcagcgccgaaaccctctcgggcggtgaggcgcagcgtatccgcctcgccagccaaatc
ggcgccggactggtgggcgtgatgtacatcctcgatgaaccctccatcggcctccatcag
cgggacaatgaacgcctgctaaaaaccctcacccacttacgcgacataggcaataccgtc
attgtcgtagaacacgatgaagatgccatccgccttgccgaccatgtgatcgacataggc
ccgggcgcaggtgtgcacggcggccaggtaatcgcccaaggcaacgttaaagcgatcatg
gctaacaaggaatccatcaccggccagtatttaagcggtacccgtgaaattgccataccc
gccaaacgccatccatttgatgcaaaaaacaaactgcggttgattggcgccaaaggtaac
aacctgcaaaacgtcaccctggaaattcctgtaggcctgatgacatgcgtcaccggtgtc
tcgggctccggcaagtccacgctgatcaacgccacactgcacccactcgcggccacagca
ctgaacggcgccaccaccctcgaccctgcggcttacgacagcatcgaaggcctggaactg
ttcgataaatgcgtcgacatagaccaaagcccaatcggccgcacgccccgctccaacccg
gcgacctacaccggtatattcacacctattcgcgagctctttgcaggcacccaggaatcc
cgctcacgcggctaccaacccggacgcttcagtttcaacgtcaaaggcggccgctgtgaa
gcctgtcagggcgacggcgtcaccaaagtggaaatgcacttcctgcccgacgtttatgtc
ccctgcgatgtgtgtaaaggcaaacgttacaaccgcgaaacactggatgtgaaatacaaa
ggcaagaacatccacgaagtgctggaaatgacggtagaagactcgcgcgccttctttgat
gccatcccctctattgccaacaagctgcaaaccctgatcgatgtaggcctttcctatatc
cgccttgggcaatcagccacaacgctctcgggcggcgaggcacagcgggtaaaactcgcg
aaagagttatcaaagcgcgacacaggcaaaacactctacatactcgacgaaccgacgaca
ggcctgcatttttatgacatccaacaattgctgaatgtattgcatcgcctgcgcgaccac
ggcaataccgttgttgtgatcgaacataacctcgatgtcatcaaaacagcagactggata
gtcgatttaggcccggagggcggcagtggcggaggccaaatcatcgccaccggaacaccg
gaagaaattgcacaacttgaacattcccacaccgggcgctttttgaaacccatgctaaaa
gtgaaaaagaccaaagcggcaaaaaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (32)   

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