KEGG   Dickeya fangzhongdai ND14b: LH89_04295
Entry
LH89_04295        CDS       T03347                                 
Name
(GenBank) transcriptional regulator
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
ced  Dickeya fangzhongdai ND14b
Brite
KEGG Orthology (KO) [BR:ced00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ced03000]
    LH89_04295
Transcription factors [BR:ced03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    LH89_04295
SSDB
Motif
Pfam: Peripla_BP_1 Peripla_BP_3 LacI HTH_23 HTH_8 HTH_38 Sigma70_r4_2 Peripla_BP_4 HTH_17 HTH_24 HTH_IclR HTH_AsnC-type HTH_3 HTH_29 HTH_Crp_2 HTH_Tnp_ISL3 HTH_28 HTH_30 HTH_36 HTH_50 Crp Sigma70_r4 HTH_7 Sigma54_DBD
Other DBs
NCBI-ProteinID: AIR68466
Position
complement(968621..969646)
AA seq 341 aa
MSLKQIAKTLGLSVTTVSRALNGYDDVAAETRLRVEEVARRLGYRPNTFARRLKMGRIDA
VGLVFPLQPAPLSNTTFMEMVAEISHELSKQEIDLLLIADEEQADHPAFLRMIESRRVDA
LIVAHTLQQDSRLQYLQSIRFPFLALGRSDLPSPYAWFDFDNQAGAALAARHLITLGHRH
IAFLGEHHPQSFIVQRRAGYLDALAAAGIDRRDELLRQIAPSRREGYQTTLQWLALPQPP
TAIVVDGSTQGEGAALALRDSGRLQGEQAVSLIVYDGLPADSLVEIPVTAITQATRVQVG
QQIADMVFRLLAGDDPASLQVLWQPQLRAGQTDNPPPAQAG
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgtcactgaaacagattgcaaaaacgctagggctgtcggtcactaccgtcagtcgggcg
ctgaacggctacgatgacgtggccgccgagacgcgtttgcgggtggaagaggtggcgcga
cgtctcggctatcgccccaacacctttgcccgccgcctgaaaatgggccgcattgatgcg
gtgggtctggtgttcccgttgcaacctgcgccgctcagcaatacgacctttatggagatg
gtggcggagatcagccatgaattgtcgaagcaggagattgacctgttgttgatcgccgac
gaggagcaggccgaccaccctgcgtttttgcgcatgattgaaagccgccgggtggatgcg
ctgattgtcgcccacaccctgcaacaggactctcgcctgcagtatctgcaatcgatccgc
tttccatttctggcgctcgggcgcagtgacctgccgtcgccctatgcctggttcgatttc
gacaatcaggccggcgccgcgctcgccgcccgtcacctgatcacgctcggccatcgccat
atcgcctttcttggcgaacaccacccgcagtcgttcattgtccagcggcgcgccggttat
ctggacgcgctggccgccgccggtatcgaccggcgcgacgaattgctgcgtcagatagcg
ccatcacgccgggaaggctaccagaccaccttgcaatggctggcattgccgcagccgccc
accgccatcgttgtcgacggcagtacgcagggggagggggccgcgctggcgttgcgcgac
agcggacgcctgcagggcgagcaggcggtatcgctgatcgtttatgacggcctgccggct
gactcgctggtggagataccggtcaccgccattacgcaggccacccgcgtacaggtcggg
cagcaaatcgccgatatggtatttcgcctgctggcgggagacgatcctgcgtcgttgcag
gtattgtggcaaccgcaattgcgtgccgggcagaccgataacccgccgccggcgcaggcc
ggatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (30)   

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