KEGG   Caenorhabditis elegans (nematode): CELE_C04F5.1
Entry
CELE_C04F5.1      CDS       T00019                                 
Symbol
sid-1
Name
(RefSeq) Systemic RNA interference defective protein 1
Organism
cel  Caenorhabditis elegans (nematode)
SSDB
Motif
Pfam: SID-1_RNA_chan
Other DBs
NCBI-GeneID: 178900
NCBI-ProteinID: NP_504372
WormBase: WBGene00004795
Ensembl: WBGene00004795
UniProt: Q9GZC8
Structure
Position
V:5119970..5126916
AA seq 776 aa
MIRVYLIILMHLVIGLTQNNSTTPSPIITSSNSSVLVFEISSKMKMIEKKLEANTVHVLR
LELDQSFILDLTKVAAEIVDSSKYSKEDGVILEVTVSNGRDSFLLKLPTVYPNLKLYTDG
KLLNPLVEQDFGAHRKRHRIGDPHFHQNLIVTVQSRLNADIDYRLHVTHLDRAQYDFLKF
KTGQTTKTLSNQKLTFVKPIGFFLNCSEQNISQFHVTLYSEDDICANLITVPANESIYDR
SVISDKTHNRRVLSFTKRADIFFTETEISMFKSFRIFVFIAPDDSGCSTNTSRKSFNEKK
KISFEFKKLENQSYAVPTALMMIFLTTPCLLFLPIVINIIKNSRKLAPSQSNLISFSPVP
SEQRDMDLSHDEQQNTSSELENNGEIPAAENQIVEEITAENQETSVEEGNREIQVKIPLK
QDSLSLHGQMLQYPVAIILPVLMHTAIEFHKWTTSTMANRDEMCFHNHACARPLGELRAW
NNIITNIGYTLYGAIFIVLSICRRGRHEYSHVFGTYECTLLDVTIGVFMVLQSIASATYH
ICPSDVAFQFDTPCIQVICGLLMVRQWFVRHESPSPAYTNILLVGVVSLNFLISAFSKTS
YVRFIIAVIHVIVVGSICLAKERSLGSEKLKTRFFIMAFSMGNFAAIVMYLTLSAFHLNQ
IATYCFIINCIMYLMYYGCMKVLHSERITSKAKLCGALSLLAWAVAGFFFFQDDTDWTRS
AAASRALNKPCLLLGFFGSHDLWHIFGALAGLFTFIFVSFVDDDLINTRKTSINIF
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgattcgtgtttatttgataattttaatgcatttggtgattggtttaacccagaacaat
tcaactacaccttcgccaattatcacctcaagtaacagctctgtacttgtattcgagatt
tcttcaaaaatgaaaatgatcgaaaaaaagctggaagccaacacagtccatgtccttcgc
ctggaattagatcaaagtttcatattagatttaaccaaagtcgccgcggaaatcgttgat
tcttcgaaatacagtaaagaagacggtgttatactcgaagtaacagtttcaaatggccgt
gatagttttttattgaaacttccgacggtttatccgaacttgaagctctatactgacgga
aaactgctcaatccgctcgttgagcaagatttcggggcgcacagaaagaggcacaggata
ggcgaccctcatttccatcaaaacctgatcgtaaccgtgcagtctcgattgaatgctgat
atagattataggcttcatgtgactcatttggatcgggcccaatatgattttctgaagttc
aagacgggacagaccacgaaaacgttgtcgaatcagaagctgacgtttgtcaagccgatt
ggattttttttgaattgcagcgaacaaaatatttcccaattccacgtcacattgtacagt
gaagatgatatttgtgcaaatctgataactgtgccggcgaatgaatccatctatgatcga
tcagtgatttccgataaaactcacaatcgacgtgtcctatcattcaccaaaagagccgac
atttttttcactgaaactgaaatctcgatgttcaaatcattccgaatcttcgtcttcata
gctcccgatgattctggatgttctaccaacacatcacgcaaaagtttcaacgagaaaaag
aaaatatcttttgaattcaaaaaactggaaaatcaatcatacgccgtcccgacggctttg
atgatgatatttctgacgacaccgtgtcttttgttccttccaattgtgattaatattatc
aagaatagcagaaaattggcaccatcacaatcaaatcttatctcattttctccagttccg
tctgagcaacgggacatggatttgagccatgatgagcagcagaatacgagctcagaactc
gaaaataatggagaaattccagcagcagaaaatcaaattgttgaagagatcacggctgaa
aatcaagaaacgagcgtagaagagggaaaccgggaaattcaagttaaaattccgttgaaa
caggattcattatcactccatggccaaatgcttcaatatcccgttgcaataattctccca
gttctcatgcacacagctatcgaattccataaatggacgacatctacaatggcaaatcgc
gacgaaatgtgcttccacaatcatgcgtgtgctcggccattgggagaacttcgagcttgg
aataatatcatcaccaatataggatatactctttatggagccatcttcattgttttgtcg
atatgtagaagaggccgtcatgagtattctcatgtttttggtacatatgaatgcacactt
ttagatgtgactattggtgttttcatggttttgcaatcaattgctagtgccacttatcat
atttgccccagtgatgtggcttttcagtttgatacgccgtgcatccaagttatctgtgga
cttctcatggtccgtcagtggtttgttcgtcacgaatctccatcaccagcctatacaaat
atcctactagttggagttgtctccttgaactttctaatatctgcattctccaaaacatca
tatgtccgattcatcatcgctgtaattcatgtcattgtcgttggatcgatctgtttggca
aaggaaagatccttgggatcggaaaaattaaaaactcgatttttcatcatggccttctcg
atgggaaatttcgcagcaatcgtgatgtatctgacgctttcggcgtttcatttgaatcaa
atagccacgtattgctttattataaattgtatcatgtatctgatgtactatggatgcatg
aaagttttacatagcgagagaataacgtcgaaggctaaactttgtggagctctgtcactg
ctcgcgtgggctgttgccggatttttcttctttcaagatgatacagattggacgagatct
gcggcggcgagccgagcactcaacaagccatgcctgctactcggcttcttcggttcccac
gatttatggcacatcttcggagcattggccggtcttttcacattcattttcgtctccttt
gttgatgatgatctcattaatacacgcaaaacttcgattaacattttctag

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Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (1)   
   Pfam (1)   
All databases (39)   

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