KEGG   Caenorhabditis elegans (nematode): CELE_F01F1.4
Entry
CELE_F01F1.4      CDS       T00019                                 
Symbol
rabn-5
Name
(RefSeq) FYVE-type domain-containing protein
  KO
K12480  Rab GTPase-binding effector protein 1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CELE_F01F1.4 (rabn-5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_F01F1.4 (rabn-5)
Membrane trafficking [BR:cel04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    CELE_F01F1.4 (rabn-5)
 Protein recycling
   Rab4 associated proteins
    CELE_F01F1.4 (rabn-5)
SSDB
Motif
Pfam: Rab5-bind FYVE zf-RING_6
Other DBs
NCBI-GeneID: 175823
NCBI-ProteinID: NP_498266
WormBase: WBGene00017161
Ensembl: WBGene00017161
UniProt: Q19088
Position
III:5864553..5866541
AA seq 414 aa
MTEPSASEEVSAGVNAEEPPIPSKKISQVSPNPTLQCEMCQNYEVNLTALQENERKLKEE
VKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCLNQVNEAAKANAKSEQRLDELSAK
HDKSIEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSEKIDMPADLDQ
LQFICLKNREELIETRAAKEHTEQQLQDEITVLRAQILEERAHREDQEVTFTAEISRLQS
ELGKINTRMVVASETIADQDSNIRQIRDLQTTVGELETQVQQVQNERAAVEQTAQNYKQR
CTSLQQELDTSEVVQRDFVKLSQSLQIQLEKIRQSEQEVRWQWDDDVDQCSNCDTSFARV
KVKPHCLHCGRIFCMNCLKDTVPSGPNHRPANVCKVCHTLLNRDTKPFFATQDK
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgacagaaccgtcggctagcgaagaagtgtctgccggagtgaatgcagaggagccgcca
ataccgtccaaaaagatttcgcaagtctcaccgaatccaacgcttcaatgcgaaatgtgc
cagaattatgaagtgaatttgactgcattacaggaaaacgaacgaaagttaaaggaagaa
gtgaaggcggcaatggagttgaacgaaagatatcaattggatttgagcaatgaacgagac
tatcgaaaagaattggaaaagaaaatgaacgaattatcgactaattgtttgaatcaggtt
aacgaggcggcaaaggcaaatgccaagtcggagcagcggctggacgagctcagtgcgaag
cacgacaaatcgatagaagtattcactgatcaattgaatttggctcgtgacaaactgcaa
caagccgacgatgactttgttacattaggaaaaaagtacaaaaagcttctcgggtccaca
cgaaaatcagcacaagaacttcggtccgagaaaatcgatatgccagctgatcttgatcaa
ttacaatttatttgtctcaagaatagggaagaattgatagaaactcgagctgcaaaagag
cacaccgagcagcagctgcaggatgagatcaccgtcctgcgagctcagattctagaagaa
agagcgcacagagaagatcaggaagtgacatttactgcagagatcagcagattgcagtcg
gaattaggaaagatcaacactcgaatggttgttgcatcggaaacaattgcagatcaagat
tcgaatatcagacaaattagagatcttcaaacaactgtcggtgaacttgagacgcaggtt
cagcaggttcaaaatgagagagccgctgttgaacagacggcacagaactacaagcaacgg
tgcacaagtcttcaacaagaactcgacacatctgaagttgtgcagagagattttgtgaaa
ttatctcaaagcctccaaattcaattggagaagattcgacagtcggaacaagaagtacga
tggcaatgggatgatgatgtagatcaatgctcaaattgtgatacatcgtttgctagagtt
aaagttaaacctcactgtcttcattgtggtcggatattctgcatgaactgcctgaaagac
accgttccaagtggaccaaatcatcgaccagccaatgtgtgcaaagtatgtcacacactg
ctcaatcgggatacaaaaccattctttgcaacgcaggataagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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