KEGG T00019: CELE

Caenorhabditis elegans (nematode): CELE_F13E6.6

Entry

CELE_F13E6.6      CDS       T00019

Symbol

rhgf-1

Name

(RefSeq) Guanine nucleotide exchange factor

K07532

Rho guanine nucleotide exchange factor 12

Organism

cel Caenorhabditis elegans (nematode)

Pathway

cel04361

Axon regeneration

Brite

KEGG Orthology (KO) [BR:cel00001]
09150 Organismal Systems
  09158 Development and regeneration
   04361 Axon regeneration
    CELE_F13E6.6 (rhgf-1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_F13E6.6 (rhgf-1)
Membrane trafficking [BR:cel04131]
Others
  Rho GTPase associated proteins
   Rho guanine nucleotide exchange factors (GEFs)
    CELE_F13E6.6 (rhgf-1)

SSDB

Motif

Pfam:

RGS-like RhoGEF PH_16 PDZ C1_1 PDZ_6 PDZ_2 C1_2 SOS1_NGEF_PH PDZ_Tricorn DUF6565

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

WormBase:

UniProt:

Position

X:complement(10697834..10711869)

AA seq 1340 aa
MRSYEFVTNTPLKLDRHKVYLVDDVAVTRTVPLSQPLSPSTASSSYNMIERCVVVQRQPD
GFGLTVNSEFPVYVHTLKQDGAAYCAGVRQGDRIVKVNGMSVSPNNHKEVLQMISNGHNV
ALTLLGKPPDPISNISFPNQQVEQKIHIADPVLIEASSKSWRQRRNELLGQMVAEERRNV
EGLRESSQNGEKIDRALKRIVSLQSQLKQLKPESIISDSQKSLTNLNMDIDSDEEENDVV
YLPESQGGPFSNLAELKTHPAHLAVFINYLLLHGNPSSLFFYLITDAYQSAYGTAKEFRR
WAFEIFSTFIIPNSPMCIPNSNQSVIQPIDKIMCMTAEHIGDSDTDTLKRIFVPGRQRAV
TDINMYLNDFRQKKQLGGQVSESTNQLTHMVRGDMTMEHRVGEQMLFRCLEQCSNSTDFD
SCEIRTQSIISSLATVIKIVLGKTSSSSNEKMLDKFPQFMARDKPPGKSRKLPANIKNRI
QVKGHSFSINSVNTVHYCYQCRDAIWGMQPWIYFCSNCDVKVHPHCTSALTDACYPVTQS
KQKSKSRLSGLIGRSDANDDEDSGSNARHEQPNVKSTSSDSGIGGEHNMDRGLVSRSHSM
RYRVATLPQSLSEDKVSIPSSKRDRSVTPSWQRSTGYDLTPADEIDESDIGDRKSKYLER
RSLESSSRMAIDLQSVSAASSCSHHSGSVAMDDDICVRRTTTLQFSRFMDGDSDFEIETE
ATPLEQLIGWDVIRHLKPKEKKRQEVINELFHTERTHVRNLKILYHVFYKPIVTSKIVTE
ELANLLFANLEELLNLHKSMSDAMRAEVEKWRSAPPRVNGGIYGDIGVLMESMFDGEAAE
NLMRVTATFCQHQQHALEFLRTRCKREKDDAFVRFLAEAESNPVCRKLQLKDMIPVEMQR
LVKYPLLLETIAKYTTEPSEEQNCLLRTVASAKRILSAVNTAKRNAENLRRLEELQKRTD
TSPFDKEFVGHDYTNLNLTKFRLVHDGPLTCRFNRGKMIELHVVLLENMLVLFTKNSDGN
KLVLKALEPSKETRWSPILPLAPLIAKEKANDKRAFFLIFNSQYGAQIYELVAGTATERK
TWFKLMGDQIMSEKKNQAAGIDHNFDVSAQTTLDSDGVAKVNVVTHPRLVNANEITIQQP
TILEHAQPVLTPAEKLKRSDEIIIQTLITKQTILAQFLSNDDSKGNTEELEKITEVLGGL
AVVDLKQRDGKELAMSAIVHGNRLLDSINQSLNIRKEMGENGLDIYILNNQEPNVPSVPS
YKLTAIAAPLMNHLKALMQVIQDQQNELNLVKQQLYHYKKLASDVDTRDRSVSEETLTDL
GEDRKMVPKRPRLPSIQPMT

NT seq 4023 nt +upstreamnt +downstreamnt
atgcgatcgtacgagtttgtaaccaatacaccactcaaacttgatcggcacaaagtatac
ctcgtcgacgatgtggctgtcacaaggactgtacccttatcgcagccattatccccatca
accgcatcatccagttacaatatgatagaacgatgcgtagtagttcaacgacaaccagat
ggtttcggtctgacggtgaacagcgagtttccagtttatgtgcatactctgaaacaggat
ggagctgcttactgtgcgggtgttcgtcaaggagatcggatagtcaaggtcaatggaatg
tcggtgtcgcccaataaccataaggaagtgctccaaatgatatcgaatggccacaacgtt
gcattgactctacttggaaaaccaccggaccccatatccaatatttcttttccgaatcaa
caagttgagcaaaaaatacatatcgctgatccagtgctcatcgaggccagctcaaagagt
tggcgacaacgacgcaacgaattacttggccagatggtagctgaagaaagacgaaacgtt
gagggtctacgagagtcatctcaaaatggcgaaaaaattgacagagctttaaaacgaatt
gtttcattgcagtcacaactgaaacaattaaaaccagaatcaattatctcggatagtcag
aaaagtttgacaaatctaaacatggacattgatagtgacgaagaggaaaatgacgttgtc
tatttgcctgaatcacaaggaggcccattttctaatttggcggagctcaaaacccatcca
gcacatttggcggtgttcataaattatcttttactacacggaaatccaagtagtttgttt
ttctatctaatcaccgatgcatatcagtccgcatacggcaccgccaaagaattccgacgt
tgggcgttcgaaatattctccacattcatcattcctaattccccaatgtgtattcccaac
tcgaaccaaagcgtcattcagccgattgacaagattatgtgcatgacagctgagcatatt
ggagacagtgatactgacacattaaaacgaatatttgtgccaggacgacaaagagctgta
accgacatcaatatgtatctgaatgactttcgacagaaaaagcaactcggtgggcaggtg
tctgaatcgacgaatcaactgacgcatatggttcgaggtgacatgacaatggagcacagg
gttggagagcagatgctgttccgttgtctcgagcaatgcagtaattcgacggacttcgac
tcttgtgaaattcgtacgcagtcaataatttctagtcttgcgacagttatcaagatcgta
ttgggaaagacatcgtcgtcgtctaacgagaaaatgcttgacaagtttccgcagttcatg
gcacgcgacaagccacccggaaagagtcgcaagttgccggcaaacatcaaaaatcgcatt
caagtcaaagggcatagcttttcaatcaactcggtgaacacggttcactattgttatcaa
tgtagggatgctatctggggaatgcaaccatggatctatttttgtagcaattgtgatgtt
aaagttcatcctcactgcacatcagcacttacggatgcttgttacccggtaactcaatct
aaacaaaaatctaagtctcgtctatctggtttaattggccgttccgatgctaacgacgat
gaagactcgggaagcaatgcacggcacgagcagcctaatgtgaaatccactagctcggac
agcggaattggcggtgaacataacatggatcgtggcttggtatccagatcgcatagcatg
agatatcgcgttgcaactctcccacaatctctatctgaagataaagtttcgattccaagt
tcaaaacgagataggtcggtcacacctagttggcaacgatcaacgggatatgatttgacg
ccggctgatgaaatagacgaaagtgatattggtgacagaaaatcgaaatatcttgaaaga
agatctttggaaagctcgagtagaatggccattgatctacaaagtgtcagtgcagcttct
agttgttcacatcatagtggttccgttgctatggatgacgatatatgtgttcgacgaacc
acaactcttcaattctctagatttatggatggcgatagcgattttgaaattgaaaccgag
gcaacgccgttagaacaactgattggatgggatgttattaggcatctgaaacctaaagag
aaaaagcgtcaggaagtgataaatgaattatttcacacggagcggactcacgttaggaat
ctcaaaatattatatcatgtattttataagcctattgtcaccagcaaaattgtaactgaa
gaacttgcaaatctgttatttgccaatctagaagagctcttgaatttgcacaaaagcatg
tctgatgctatgagagcagaagttgaaaagtggagatcagcaccgcctcgtgtgaatgga
ggaatttatggggacattggtgtgctgatggagagcatgtttgatggtgaagcagccgaa
aacctgatgcgagttacggcaacgttctgtcaacaccaacaacacgcgctcgagtttctc
agaacacggtgtaaacgagaaaaagacgacgcttttgtgaggtttctagccgaggcagaa
tcgaatcccgtttgtcgtaagctacagctcaaagacatgattcccgtggaaatgcaaagg
cttgtcaaatatcctttattgctggaaaccattgcaaagtatacaaccgagcccagtgag
gaacaaaattgtttactccgaacggtagcatcagcgaaacgtattctaagtgctgtgaat
actgccaaacgaaatgctgaaaacttgagacgtcttgaagagctgcaaaaacgaacagac
acgtcgccgtttgacaaagagtttgtcgggcatgactatacgaacttgaatttaaccaaa
tttcggcttgtgcacgatggtcctttaacatgtcggtttaacagaggaaagatgatagaa
ttgcatgttgttcttcttgagaatatgctagtattgttcacaaagaacagcgatgggaac
aaactagtgcttaaggcattggaaccctcaaaggagaccagatggtcaccgattcttcca
ttagctcctctgattgctaaagaaaaagccaatgacaagcgtgcatttttcttaattttt
aatagtcagtatggtgcgcaaatttatgaactggtagcgggaacggcgacagaacgaaaa
acatggtttaaactaatgggtgaccagataatgagtgagaaaaagaaccaagctgccggt
atcgatcataactttgatgtgagtgcgcaaactacgctggattctgatggtgtggccaaa
gtaaatgtcgttacacatccaagattggtgaatgcaaatgaaattacaattcaacaaccg
accattttggagcatgcacagcccgtattaactcctgcggaaaaattaaaacgaagcgat
gagatcatcattcaaacacttatcactaaacagacaatactggctcaattcttgtcaaac
gatgactcgaaaggaaacacggaagaactcgaaaaaatcactgaagtgcttggaggtctt
gcagttgttgacttgaaacaacgagatggaaaggaacttgcaatgtctgcaatagttcat
ggaaatcggctattggatagtatcaaccaaagtcttaacattcgaaaagaaatgggagaa
aatggattagatatctatattcttaataaccaagagcctaatgtgccgtcagttccgtct
tataaactgactgctatcgccgcaccattaatgaatcatctgaaagcactaatgcaggtg
attcaggaccaacaaaatgaacttaatcttgtcaagcagcagctttaccactacaagaaa
ctcgcatctgatgtggatactcgcgacagatctgttagcgaagagactcttactgatttg
ggagaagatcgaaaaatggttccgaaacgaccaagactaccttcaattcaaccaatgaca
tag

All links

Gene (32)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (46)   

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