KEGG   Caenorhabditis elegans (nematode): CELE_F26F12.7
Entry
CELE_F26F12.7     CDS       T00019                                 
Symbol
let-418
Name
(RefSeq) Protein let-418
  KO
K11643  chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CELE_F26F12.7 (let-418)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F26F12.7 (let-418)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CELE_F26F12.7 (let-418)
  Chromatin remodeling factors
   NuRD complex
    CELE_F26F12.7 (let-418)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT DUF1087 Chromo PHD HDA2-3 ResIII PHD-1st_NSD PHD_2 DEAD PHDvar_NSD Chromo_MIT1
Other DBs
NCBI-GeneID: 178970
NCBI-ProteinID: NP_504523
WormBase: WBGene00002637
Ensembl: WBGene00002637
UniProt: G5EBZ4
Position
V:5826833..5832831
AA seq 1829 aa
MSTEEDPSLVDAEESMEEGSVTQDATEETEEEEEQEQGDEAGPSERKRSSRKKGGKGGKK
GSKKSAAAASKVEIPDPYNSTSEEVCAAIGLTDVEFDYDEEEFQGISNLKTFSSIIKPQI
LEANPGTNVSKMYPMFQVKYKEYQDHMAAQGKPVQKQARGSKTPAVSTPVIPPRSAPTKT
RSARRKRRDSDAPDSDQEFEAFIKQQEQLEDDLVKDKEDARIKRAAEREEKKKGALEAAR
AAKKAKLEKGEEAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC
IEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCP
RCETVKPEHKIEKILCWRWKEIPYPEPLEAGKEASSDDAMLKPPRKMEPRREREFFVKWK
YLSYWQCSWVSEMLLEVHFRMLILLYWRKNDSDAPPEFEESVTSRHHSDNDPYKLRERFY
QYGIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWERDDSNIANYEEAIIKYWQ
HRESKLNEDIPKNVQKMIAKHREAKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGG
KLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPL
STIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMK
FHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTP
LQNNLEELFHLLNFLSKERFNQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLT
GMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVKNGGTQMSLMNVLMELKKCCNHPYL
FVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMED
LCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIY
DSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVVRAGLG
GKEGKTMSKTELDDVLRWGTEELFSEDLDAAEGEGSEKKGAAAQEIVWDDAAVDALLDRS
NKEETPAGEDGEEKAEWQNEYLSSFKVASYQTKETEGQEEEEEEETEVIKEDEKEPDPDY
WEKLLKHHYEQDREIELQKLGKGKRVRKQINYASENMGTDWSKQNQTQDDDDDNESYRGS
DNGDGLNSDEDDYDEKKKRRRDEEKMPPLMAKVNGQVEILGFNPRQRKAFYGAVMRWGMP
PQDSHQSQWLVRDLRNKSEKVFRAYASLFMRHLCEPGADGHDTFNDGVPREGLNRQHVLG
RIGLLSLVRRKVQEFEQYNGQWSMPEIQDEVLAKAANGSAQGSSRSTPKPKEEPKEEPME
KEDATETVNGATSEPATDAESEQNAPVDEPMDTDEAKEPKEEPIETEKPRAARPSFKFNI
CDGGFTELHSLWANEEKVARNGKEYEIWYRRHDYWLLAGVVVHGYGRFQANFNDIINDPR
FSVLNEPFKEVGAEATGSDIKAKFMQRRFKLIEQSLVIEEQLRRAAHANRHLQPDNVGPL
AQRFADLENIAESQANIAKESSAGNRNANAVLHKTLVQLDEILSDMKADVSRLPSTFTQL
ATVTERLNMTERQILSRLTTKDEDAIANRSVLPPPGPFVTPILRQQMDGIQPKFAALYSK
FMSENGERMEEDEPVEAEEEEGVKQEPDDETQDSAEAPPVLSAEVNSDDSNDVPSTSAAA
AVSSETAADAEPASAEDQAPTDEPEPMET
NT seq 5490 nt   +upstreamnt  +downstreamnt
atgtcaactgaagaagatccgtctttagtggacgcggaagaatcaatggaagagggttct
gtcactcaagacgcaactgaagaaacagaagaagaggaagaacaagagcaaggcgatgag
gctggaccatctgagcgaaagcgttcttctagaaagaaaggcggaaagggaggcaaaaaa
ggatccaaaaagagtgctgccgcagctagcaaggttgagattcctgatccgtataattcg
acaagtgaagaagtttgtgctgctatcggattgacagacgtcgaatttgattatgatgaa
gaggagtttcaaggaatttctaatctgaagactttctcctcaatcatcaagccacaaata
ctggaggcaaaccccggaaccaacgtatccaagatgtacccgatgttccaagtcaaatat
aaagagtatcaagatcacatggctgcccaaggaaaacctgttcaaaaacaagctagaggt
tcaaagactccagcagtttccacacccgtcatccctccacgatcagctccaacgaagact
cgttctgcaaggagaaagcgtcgagattccgatgctcctgatagtgatcaagagtttgag
gcatttattaagcaacaagaacaactggaggacgatttggtaaaagacaaggaagatgct
cgtatcaaacgtgcagcggaaagagaagagaagaaaaaaggagcattggaagctgctcgt
gccgctaaaaaagcaaaattagaaaagggcgaagaagctgaaaataatgactactgtgag
gagtgcaagcaagatggagaacttcttctttgtgacacctgtccccgcgcttaccataca
gtctgtattgatgaaaatatggaagaaccaccagagggtgattggagttgtgctcattgt
atcgaacatggcccagaagtagttaaagaagaaccggcgaagcaaaacgatgaattctgc
aagatctgcaaagaaactgagaatcttctgctttgtgatagttgtgtatgctcattccac
gcatattgtattgatcctccacttaccgaagttccgaaagaagaaacatggtcgtgccca
cggtgcgagacggttaagccggaacacaaaatcgaaaaaatcctttgctggagatggaag
gaaatcccgtatccagaacctctcgaagctgggaaagaggcttcgagtgacgatgcgatg
ctcaaaccaccacggaaaatggaaccaagacgtgagcgtgaattcttcgtgaaatggaag
tatttatcatactggcagtgttcttgggtctccgaaatgctgttggaagttcatttccgt
atgcttatattgctatattggcgcaaaaatgattccgatgctcctccagaatttgaagaa
tccgttacgtctcgtcatcattctgataatgatccttataaattgcgcgagcggttctac
cagtatggtatcaaaccggaatggatgcaaattcatcgtattatcaatcatcaatcatat
gcaaagtcgcagcaggattaccttgttaagtggaaggagctcagctatgatcaagccact
tgggaacgagatgattctaatattgccaattacgaagaagcaatcattaaatactggcaa
catcgtgagagcaaattaaatgaggatattcctaaaaatgtgcagaagatgattgctaaa
catcgcgaagctaaaggtcttcctccaaaagaagacgaaaagaaaaagaagaagcgtgag
aagattgacatccgtaaaaaatatgaagttcagcccgactacgttacggaaaccggagga
aaacttcatccatatcaactggaaggacttaactggcttcgtcattgttggtccaacgga
actgatgcgattctcgctgatgaaatgggtcttgggaagactgttcaatcgcttactttc
ttatacagtctcatgaaggaaggccattgcaaaggaccatttttgattgccgctcctcta
tcaactattatcaattgggagcgtgaggctgaacaatggtgtcctgatttctatgtggtc
acttatgttggtcttagagatgctcgtgttgtgctccgagaacatgagttttctttcgtt
gaaggtgccgttcgatccggaccgaaggcttcaaaaatgaagacgacagagaatatgaag
ttccacgtgttgctcacttcttatgagactatcaatatggataaaactatactttcttcc
attgaatggggagctcttgttgttgatgaggctcatcggttaaagaataatcagtcgttg
ttcttcaaaaatctcaatgaatatactattcattatcgcgtacttctcaccggaactcca
cttcaaaacaatttagaagagctcttccatctcctcaatttcttgtccaaagaacgtttc
aatcagctcgaggctttcactgccgaattcaatgagatttccaaagaggatcaaattgaa
aaacttcataacttgctcggacctcacatgcttcgccgtctcaaagctgatgtgttgact
ggcatgccatcgaaatcagaattaattgttcgagttgaactgagtgctatgcagaaaaaa
tggtataaaaatattctgactcgcaattttgatgcattgaatgtgaagaatggaggaact
caaatgtcattgatgaacgtccttatggaattgaagaaatgttgtaatcatccatatctt
tttgtgaaggcagagttggaggctccgaaagagaaaaacggaatgtatgaaggaacggcg
ctcatcaagaattccggaaagtttgttcttcttcaaaaaatgttgagaaagctgaaggat
ggtggccaccgagtgcttatcttctcacaaatgacaaggatgctggacataatggaagat
ttatgtgaatatgaaggatacagatatgaaagaatagatggaagtatcatgggacaaatg
agacaagatgctatcgatcgttacaatgctcctggagctcaacaatttattttcttgctc
tccactcgagctggaggtcttggtatcaatctggcaactgctgatacggttatcatatat
gattctgattggaatcctcacaatgatattcaagctttctctcgtgcacatcgtctcgga
cagaagcataaagttatgatttatcgttttgtaacaaagaaatctgtcgaagaaaaaatc
acttcagttgccaagaagaagatgcttttgaatcacttggttgtacgtgcaggattggga
ggaaaagaaggaaagacaatgagcaagactgagctggacgatgtgcttcgatggggaacc
gaagagttattcagtgaggatcttgatgctgccgaaggcgaaggctcggagaagaaaggt
gctgccgcacaagaaattgtttgggatgatgcagctgtagatgctcttctcgatcgcagt
aacaaagaagagactccagcaggagaagatggcgaagaaaaagctgaatggcaaaacgaa
tatctaagctcgttcaaggtggccagctatcagacaaaagagactgaaggacaagaagaa
gaggaggaagaggaaacggaagtgattaaagaagatgagaaagaaccagatccagattat
tgggagaagctgctcaagcatcactacgaacaggacagggaaatcgaattgcaaaagctt
ggaaagggaaaacgtgttcgcaaacaaatcaactatgccagtgagaatatgggaactgat
tggagcaagcagaaccaaacccaagatgatgacgatgataacgagtcgtaccgtggttcg
gacaatggcgacggcctgaactctgatgaagatgattacgatgagaagaaaaagcggcgt
cgtgatgaagaaaaaatgcctccactcatggctaaagtcaatggacaagttgagattctt
ggtttcaatccacgtcaacgcaaggcgttctacggggctgttatgcgctggggaatgcct
ccacaagattctcatcaatctcaatggcttgttcgagatctgagaaacaaatcggaaaaa
gtcttccgagcttatgcttcactgttcatgcgacatctctgtgagcctggagctgatggt
catgatacctttaatgatggagttccaagagaaggtcttaatcgtcagcatgttcttggc
cgaatcggattgctgagtttagttcggcggaaggttcaagaatttgagcaatataatggc
caatggtctatgcctgaaatacaagacgaagttctcgctaaagctgccaatggttcggca
caaggatcttcaagaagtactccgaaaccaaaagaagagccgaaggaagaaccaatggaa
aaggaagatgctactgaaacagttaacggagctacatcagagccagctacagatgctgag
agtgaacaaaacgctcctgttgacgaaccaatggatacagatgaagccaaagaaccgaaa
gaagaaccaattgaaaccgagaaaccaagagcagcccgtccatcattcaagttcaacatt
tgtgacggtggattcactgaacttcactctttgtgggccaatgaagagaaagttgcaaga
aacggaaaagaatatgaaatctggtaccgcagacacgactattggcttttagctggtgtt
gttgtacacggatatggacgtttccaagctaatttcaatgacatcatcaatgatcccaga
ttctcagttctcaatgagccattcaaggaagttggcgctgaggcaacaggatctgacatc
aaagccaagtttatgcaacgtcgtttcaaacttattgaacagtcccttgtgattgaggag
caacttcgtcgcgctgcacacgccaatcgtcacttgcagccggataatgttggaccattg
gctcaacgttttgcggatttagagaatattgctgaatctcaagctaatatcgccaaagaa
agttctgctggaaatcgtaatgcgaatgccgttctacacaaaacattggttcagctcgac
gaaatactttccgatatgaaggccgacgtgtctagacttccatctacttttacacagtta
gcgactgtcaccgaacgtctcaacatgaccgagagacaaattctttcgcgactgaccaca
aaagacgaggacgcgatagccaaccgtagcgtacttccaccaccaggaccatttgtaact
ccaatacttcgccagcagatggatggcattcaaccaaagtttgcagctctttacagtaaa
ttcatgtctgaaaatggagaaaggatggaagaggatgaaccagtagaggcagaagaggaa
gaaggtgtaaaacaagaaccagatgatgagactcaagatagcgccgaagctccgccagtt
cttagtgcagaagtgaattccgacgatagcaacgatgttccatctacttccgctgctgct
gctgtcagttctgaaacagctgccgacgccgaaccagcttccgccgaagatcaagctcca
acagatgagccagaaccaatggaaacttga

  All links  
Gene (66)   
   RefGene (61)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (85)   

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