KEGG   Caenorhabditis elegans (nematode): CELE_K07A1.11
Entry
CELE_K07A1.11     CDS       T00019                                 
Symbol
rba-1
Name
(RefSeq) putative histone-binding protein rba-1
  KO
K10752  histone-binding protein RBBP4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03082  ATP-dependent chromatin remodeling
cel03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CELE_K07A1.11 (rba-1)
   03083 Polycomb repressive complex
    CELE_K07A1.11 (rba-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_K07A1.11 (rba-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     CELE_K07A1.11 (rba-1)
  Histone modification proteins
   HAT complexes
    HATB complex
     CELE_K07A1.11 (rba-1)
   HDAC complexes
    Sin3A-HDAC complex
     CELE_K07A1.11 (rba-1)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     CELE_K07A1.11 (rba-1)
    PRC2.2
     CELE_K07A1.11 (rba-1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     CELE_K07A1.11 (rba-1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    CELE_K07A1.11 (rba-1)
  Chromatin remodeling factors
   NuRD complex
    CELE_K07A1.11 (rba-1)
   NuRF complex
    CELE_K07A1.11 (rba-1)
   NuRF complex (fruit fly)
    CELE_K07A1.11 (rba-1)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd MIOS_WD40 eIF2A NBCH_WD40
Other DBs
NCBI-GeneID: 172801
NCBI-ProteinID: NP_492551
WormBase: WBGene00004312
Ensembl: WBGene00004312
UniProt: P90917
Position
I:complement(9616516..9618107)
AA seq 412 aa
MSEAESCEETSKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMI
HGTHTCGGVQNHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPG
EVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSEPKDTKFRPQLRLKGHEGEGYGMSWS
NTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSV
GDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKK
MYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVI
FIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLVSSEKWETEMI
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgagtgaagctgaatcgtgtgaagaaacgagtaaagaacatagaatttggaagaaaaat
gttccatatctctacgatacagtcgtcacaaaagaggtcgagtggccttctttatcagtg
caatggatgcctgatgtcacaaaaacagagaactcggattcatcgatgcatcgaatgatt
catggaacacatacttgtggaggagttcagaatcatctcatgatctcaaagttcacaata
acgacagacacaccagaattcgacgacgctaaatgggattcggaacgtgaagagttcgga
ggttatggagagggcagcgctgcaaaatgggatactgagattaaaatcaaccatccagga
gaagttcatagggcacgttacatgccacataatcctttcattattgcaagtcgaggtcct
tctgatgacgtttatattttcgactacacgaagcacccatctgaaccaaaagacaccaaa
tttcgacctcaattgcgattgaaaggccatgaaggcgaaggatatggaatgtcgtggagc
aacaccagagagggacatttgctaactgccggcgatgacggaatgatttgccactgggat
ataaacgcgaatcagaccatttccggtcaaatagtgccacaaagcaagtttaaaggtcat
tcatcaaatgcggaggatgtttcttttcacgcgctccataatttcgtttttggatctgtt
ggagatgatagaaaactaaacctatgggatctgcgtcaatcaaagccacagctcacagcc
gtcggacatactgcagaagttaattgtattactttcaatccgttttccgaatacatttta
gcaaccggatctgttgataaaacggttgctttgtgggatatgaggaatatgcgcaaaaaa
atgtacacgctgaaacatcacaacgacgaaatatttcaagtatcgttcagcccgcattat
gaaactgttctggctagtagtggatcggatgatcgggttatcgtttgggatatttctaaa
attcaagacccatcgtcttcatcagctgcatcatctgattctgttccaccagaagttatt
tttattcacgctgggcatactggaaaagttgcagatttctcttggaatcccaaccgccca
tggactatttgcagcagcgacgaatttaatgcattacaggtgtgggaagtttcaaacagt
ttagtttcgtcggaaaaatgggagaccgaaatgatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   WORMBASE (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system