KEGG   Cricetulus griseus (Chinese hamster): 100770721
Entry
100770721         CDS       T02813                                 
Symbol
Kdm1a
Name
(RefSeq) lysine-specific histone demethylase 1A isoform X2
  KO
K11450  [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]
Organism
cge  Cricetulus griseus (Chinese hamster)
Pathway
cge04714  Thermogenesis
Brite
KEGG Orthology (KO) [BR:cge00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    100770721 (Kdm1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cge03036]
    100770721 (Kdm1a)
Enzymes [BR:cge01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.99  Miscellaneous
    1.14.99.66  [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
     100770721 (Kdm1a)
Chromosome and associated proteins [BR:cge03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    BRAF-HDAC complex
     100770721 (Kdm1a)
    REST complex
     100770721 (Kdm1a)
   Histone demethylases
    100770721 (Kdm1a)
SSDB
Motif
Pfam: Amino_oxidase SWIRM NAD_binding_8 DAO Pyr_redox_2 AlaDh_PNT_C Pyr_redox FAD_oxidored FAD_binding_2 HI0933_like FAD_binding_3 Thi4 GIDA 2-Hacid_dh_C MutS_IV Lycopene_cycl Pyr_redox_3 Sec10_N
Other DBs
NCBI-GeneID: 100770721
NCBI-ProteinID: XP_027255543
UniProt: A0A9J7FBJ8
Position
2:16714678..16767132
AA seq 986 aa
MVLVDFLPQGALSVGPALGAPELRSSLQDAALWLRGGPEGVGGAPLRLFVLTRRERAGRV
RTRRCLASHGSCEVRGGKARRLRTHGAADRAAPAARGGQAARDVVWEEGGAAAAAAAAAA
AAAAAAAAAAAAAGTEAGPGSASGAENGSEVAAPTAGLAGSTDVATGAAGERTPRKKEPP
RASPPGGLAEPPGSAGPQAGPTAGPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDES
LANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGQAGGLQDDSSGGY
GDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPK
IQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGS
GVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVS
KQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPV
SLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEAS
EVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDR
QILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKL
NTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEW
KTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILIAL
VAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAA
GSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIA
DQFLGAMYTLPRQATSGVPAQQSPSM
NT seq 2961 nt   +upstreamnt  +downstreamnt
atggtattagttgacttcctaccgcagggggcgctctccgtcggcccggctctcggagcg
ccggagctccgctctagcctccaggacgccgctctgtggctgcgaggaggcccggaggga
gtggggggagcaccgctgcggctttttgtcctgacgcggcgggagcgcgcggggcgcgtg
cgcacgcggaggtgtctggcttctcacgggtcgtgtgaggtgcggggcgggaaggctagg
cggctgcggacccacggagcggcagaccgagcggcccctgcggcccgcggcggccaggcg
gcccgagatgttgtctgggaagaaggcggcgcggcggcggcggcagcggcggcggcggcg
gcagcagcggcggcggcggcggcggcggcggcggcggctgggactgaggccgggcccgga
tcggcgagcggcgccgagaacggctctgaggtggccgcgccaaccgcgggcctggcgggc
tccaccgacgtcgccacgggggcggcgggcgagcgcacgccccgaaagaaggagcctccg
cgggcctcgccgcccgggggcctggccgagcctcccggatccgccgggccccaggcgggg
cccacggccgggcccggctccgcgacgcccatggagacgggaatagccgagacccccgag
ggccgacggaccagccggcgcaagcgggcgaaggtagaatacagagaaatggatgaaagc
ttagccaacctctcagaagatgaatactattcagaagaagagagaaatgccaaagcagag
aaggaaaagaagcttcccccaccacctcctcaagcccctcctgaggaagaaaatgaaagt
gagccagaagagccatctgggcaagcaggaggacttcaagacgacagttctggagggtat
ggagacggccaagcatcaggtgtggagggtgcagcttttcagagcagacttccccatgac
cggatgacctctcaggaagcagcctgtttcccagacatcatcagtgggcctcagcagaca
cagaaagtttttctgttcatcaggaaccgcacattgcagttatggttggacaacccaaag
attcagctgacatttgaggctactcttcaacagttggaagccccttacaacagtgatact
gtgcttgtccaccgagttcacagctacttagagcgccatggtcttatcaacttcggcatc
tataagagaataaaacccttaccaactaaaaagacaggaaaggtgattattataggttcg
ggtgtttccggcttggcagcagctcgacaactacagagttttgggatggatgtcacactt
ctggaagccagggatcgcgtaggtggacgggttgctacatttcgaaaaggaaactatgta
gctgatcttggagccatggtagtaacaggtcttggagggaatcccatggctgttgtcagc
aaacaagtaaatatggaactggccaagatcaagcaaaaatgcccactttatgaagccaat
ggacaagctgttccaaaagagaaagacgaaatggtagaacaagaatttaaccggttgcta
gaagccacctcttaccttagtcatcagctagacttcaacgtcctcaataataaacctgta
tcccttggccaggcattggaggttgtcattcagctacaagaaaagcatgtcaaagatgaa
cagatcgaacactggaagaagatagtgaaaactcaggaggagctgaaagagcttcttaat
aagatggtaaatttgaaggagaaaattaaagaactccatcagcaatacaaagaggcatcg
gaagtgaagccaccccgagatattacagctgagtttttagtgaaaagcaagcacagggac
ctgaccgccctctgcaaggaatatgatgaattagctgaaacacaaggaaagctagaggaa
aaacttcaagaattggaagcaaaccccccaagtgatgtatatctctcatcaagagataga
caaatacttgactggcattttgcaaatcttgaatttgccaacgccacaccactctctacc
ctctctcttaaacattgggatcaggatgatgactttgagtttactggcagtcacctgaca
gtaagaaatggctactcatgtgtgcctgtggctttagctgaaggcttggatattaaactg
aacacagcagtgcgacaggttcgctacacagcctcaggatgtgaagtgatcgctgtgaat
acacgttccacaagtcaaacctttatttataagtgtgacgcagttctctgcactcttccc
ctgggagtgttgaagcagcagccaccagctgtgcagtttgtgccacctcttcctgagtgg
aaaacatctgcagttcaaaggatgggatttggcaaccttaacaaggtggtgttgtgtttt
gaccgcgtgttctgggatccaagtgtcaatttgtttgggcatgttggcagtacgactgct
agcaggggcgaactcttcctcttctggaacctatataaagctccaatactaatagccctg
gtggcaggagaagctgctggcatcatggagaacattagtgatgatgtgattgttggccgg
tgcctggccattctcaaagggatttttggtagcagtgcagtaccacagcccaaagagacg
gtggtgtcccgctggcgtgctgatccctgggcccgaggttcctattcctatgtggctgca
ggatcttctggaaatgactatgatttaatggctcagccaatcactcctggcccctcaatt
ccaggtgccccacagccaatcccacgacttttctttgctggagaacatacaattcggaac
tacccagctacagttcatggtgctctgctgagtgggcttcgagaagcaggaaggattgca
gaccagtttttgggagccatgtacactttgcctcgtcaggccacatcaggtgtccctgca
caacagtctccaagcatgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (18)   
   Pfam (18)   
All databases (49)   

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